Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq532 87.8 3e-12 >seq532 Length=46805 Score = 87.8 bits (96), Expect = 3e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 ||||||| || |||||| ||||| |||| |||||| |||||||| || | | | Sbjct 28460 CTTCGTCTCGTGAGATGAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCT 28401 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 | |||||||| |||| |||||| |||| ||||||||| || || || |||||||||| Sbjct 28400 TCAGCCAGAAGATTGAAGCGAAACTGCCACTGAAGAAGATACCTTCGACCGCCGCGAACG 28341 Query 48273 C 48273 | Sbjct 28340 C 28340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931104248335360