Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq36678 107 5e-19 >seq36678 Length=505 Score = 107 bits (118), Expect = 5e-19 Identities = 164/228 (72%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 28272 TAGGGATTAATGAATCGCAAATTTCGCGATGGAAAGA-TAGCTTCATCCCCAAAATGGGA 28330 |||| |||| ||| ||||| | || |||||||| | ||| ||||| |||| Sbjct 413 TAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTT-ATCCCTCGCATGGCG 355 Query 28331 ATGCTTCTGGCTGTTCTTGAATGGGGTGTTGAAGACGAGGAGTTGGCGGAACTGGCTAAG 28390 ||| | ||||| ||||| || |||||| | |||||||| || ||||||| |||||||| Sbjct 354 ATGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAG 295 Query 28391 AAAGTAGCCAGAATGCTGACA---AAAGAAAAAGCCCCGAAGAACGGCGAATTCTTCGAG 28447 | || || ||| || |||||||| |||||| ||| | | | |||||| Sbjct 294 CGCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTGCAGCTTTCGAG 238 Query 28448 GCCTGATGTAGAAAGACTGGATCAATCCACAGGAGTAATTATGACAAA 28495 || |||| ||| ||||||||||| |||||||||||||||| |||| Sbjct 237 GCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123853046668008