Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq9276 459 7e-125 seq36678 113 1e-20 >seq9276 Length=6644 Score = 459 bits (508), Expect = 7e-125 Identities = 944/1390 (68%), Gaps = 43/1390 (3%) Strand=Plus/Plus Query 26358 CGTTATTTGATAAGAAGTGAAGGTTTCCCAACTTTGAGTTGAGCGCCGGGGATATTTATT 26417 ||| | ||||| | | ||| ||||| |||| || | ||||| || || | ||| Sbjct 4399 CGTCACTTGATGATTAATGATGGTTTGCCAAGCTTTATCTGAGCACCAGGAACGGCGATT 4458 Query 26418 CCTGCTTTTAGTTGGTGTTTGATTGCCAGTTTGTC-GGCTTTA--ATTGTCGTTTCAAAC 26474 ||||| | || || || ||||| ||||| || || ||||| | | |||| ||| || Sbjct 4459 CCTGCGTCCAGCTGATGCTTGATAGCCAGCTTATCTGGCTTGACGACTGTC---TCATAC 4515 Query 26475 TCAACGTATTCAGGAGGAAGGGCGCTTGAGTCGATGATTTCTACAATTTCTGACGGTTTG 26534 |||||| ||||| || ||| || || |||| || || | || || Sbjct 4516 TCAACGAATTCAATCGGCAGGATAGATGCATCAGTGATATCAACCTTGCGGGATGGAACA 4575 Query 26535 CGGATTGTTACCTGGTGAATACCTGCTCTAATCTTTTTCTTGCCAACCATTTCAAGCGAT 26594 || | ||||| ||||| | || |||| || ||||| || | | ||||||||| Sbjct 4576 CGAACAGTTACTTGGTGCAAGCCCGCTCGGATTGACTTCTTCCCGGCTGTCTCAAGCGAT 4635 Query 26595 GAGGCTATATATGCCATAATGCTGTCAATCTTATTTTGAATTACTGCTGCTCGTTCATTC 26654 |||||| || || | ||||| |||||| |||| | ||| | |||| ||| Sbjct 4636 CTGGCTATGTACTCCTTGATGCTTGAAATCTTGTTTTCGACTACCGACGCTCTTTCCAGT 4695 Query 26655 AGTGACTTTGCCTC-TTCCTTGAGGCGTTCAGCATA-ACCAGATTCATTTTTAATAATGG 26712 |||||||||| || ||||| | || | ||||||| | | | | | ||||| |||| Sbjct 4696 AGTGACTTTGATTCATTCCTCAAAGCCT-CAGCATAGAGCTGCT-CGTTTTTGCAGATGG 4753 Query 26713 CGAGAAGTTGTTCTATTTTATCGGTAAATTCTCCTTCCATGCCTTCTATTGTGTCAGCAA 26772 | || | || |||| ||||| | || || || || ||||| || ||||| || | Sbjct 4754 CAAGCAACTGCTCTACCTTATCAACGAGCTCGCCATCAATTCCTTCGATAGTGTCGGCGA 4813 Query 26773 TCATCTCTGGCTCTAAATCTGAATCCATCAATTTTGCGTATTCATTGGCTATTTCATATA 26832 ||||||||||||||||| | |||||||| | || ||||| ||||| || || || |||| Sbjct 4814 TCATCTCTGGCTCTAAACCGGAATCCATGAGCTTCGCGTAATCATTTGCGATGTCGTATA 4873 Query 26833 GTTTGCTCAC----TGGCAACCTCCAGTTTCGCTTTGCATTCTATGTAAATGGCTTGTAC 26888 | ||||||| | || | || || | ||| |||| ||| || ||||| || || Sbjct 4874 GCTTGCTCATGACGTCGCTCCTTCAAGCTGCGCCTTGCGCTCTGAATAGATGGCCTGAAC 4933 Query 26889 GTTCTGCTGCAATTTCATTCCAGCTGTCAGGCGATATGCTTCTGCAAAATATCGCTTCAA 26948 |||||||| | ||||| ||| || | | || || || || || |||| | Sbjct 4934 ATTCTGCTGAAGCTTCATGCCACGAGTTAACTTGAACGCATCAGCGAATAATGGCTTGAG 4993 Query 26949 ATCATCCATGTTTTCTGCCTGAGCCATTTCATCGCAAAGAAGTTGTGCTTTATCCATTAT 27008 ||||||||| |||||| | |||| | | ||| | || | | || | Sbjct 4994 TTCATCCATGCTTTCTGACGCTTCCATCTTCTGGCAGATTCCTTCTACCAGCTCGTAAAC 5053 Query 27009 TTCCTGCTGGCGT---TTCCGTTCATCTTCGCGGATATCTTCC---TCTGATTTGTGCGG 27062 ||||||| ||| ||| ||| ||||| ||| |||| || | ||||||| Sbjct 5054 CTCCTGCTTACGTGCATTC---TCACCTTCG---ATAACTTCGCTTTCAGGCGTGTGCGG 5107 Query 27063 CATAACTGGTTCA--GTCCATACACCTTCTTCTTCGTTTAGTACGTGAATAGCACTATCA 27120 ||| | || || || ||| | |||| |||||||| || |||||||| ||| |||| Sbjct 5108 CATTATCGGCTCTTGGTGCATGC--CTTCCTCTTCGTTGAGGACGTGAATTGCATTATCC 5165 Query 27121 AGACGTGATGCCTTAGGCCAATACTTGCTTGCACGCTTTACGACCGTCTTTCGCGCCATC 27180 || || || ||||| || |||||||| ||||| |||| ||||| |||||||| Sbjct 5166 AGGCGCTCGGCGCGCGGCCAGTATTTGCTTGCCCGCTTGACGATTGTCTTACGCGCCATT 5225 Query 27181 TCATTCCAGTGATTTACCCATGGTCCTTTATCGCTGAATGCTGCCTTGCTTGTT--TTCC 27238 || |||| | ||| || || || | |||||| || || ||| Sbjct 5226 TCCGCCCAGAACGTCTTCCACGGGCCGTTCTT---------TGCCTTACTGGTAGCTTCG 5276 Query 27239 TTACAGCCTCAATTTCAGCCAGACTCATCTCTTCCGTTAGATAATCACCTGCTGGCGTCT 27298 | |||| || || || || ||||| || || ||||||||||| || | || |||| Sbjct 5277 GTT--GCCTTTATCTCTGCGAGGCTCATTTCCTCTGTTAGATAATCTCCGTCGGGAGTCT 5334 Query 27299 TAACTGTGCAGTAAACGCCAACGATATCACCACGATCACCGAAGGCGTTGTATTTATGGG 27358 |||| |||||||| |||| || | |||||| ||||| ||||| |||||||| ||||| | Sbjct 5335 TAACAGTGCAGTAGCCGCCGACTACATCACCGCGATCGCCGAAAGCGTTGTACTTATGAG 5394 Query 27359 TTGGTGCTTTATCAAGCCCGTTTGACTCATAGGTATCGTTAGCATGAACAAGTTTTGCCT 27418 | || || |||| || || || || || ||||||||||| | | ||| || || || Sbjct 5395 TAGGCGCGCTATCCAGTCCATTCGATTCGTAGGTATCGTTCGAGTAAACCAGCTTGCACT 5454 Query 27419 GACCCCATGAGATAACACCAGACTCCATTGCAATATGGAGCAATCCCATATAGCTGATAT 27478 | ||||| || || | || || | ||| || | |||||||||||||| | Sbjct 5455 GTCCCCACTTAATCGACCCGGTAGCCTGAGCGAGATGAAGAAGCCCCATATAGCTGATGT 5514 Query 27479 CAAGGCAAACCATGCCGTCGCGAGGAACCAGATAAGCCAGTTTGCTGGCAGGGTTTAAGG 27538 | ||||| ||||| || || || ||||| || || ||||| || ||||| ||||| | | Sbjct 5515 CGAGGCACACCATCCCATCTCGCGGAACGAGGTATGCCAGCTTACTGGCTGGGTTCAGCG 5574 Query 27539 TGATGCCGATCGCAGCAACATTGATGATAGCGTTCTGTGCGCTGGTTGGATTTGCCAGTG 27598 | ||||| || || ||||| ||||| || |||||||| ||||| | ||||| | | | Sbjct 5575 TTATGCCAATTGCCGCAACGTTGATAATCGCGTTCTGCGCGCTTGCCGGATTCCCGATCG 5634 Query 27599 CCGTTTTAGCCAGGTAATCGTTTTTCTGGAAATACTGAATTGCAAACTGGCTTTCCTTAG 27658 ||||||| | |||| |||| || ||||||||| || || || |||||||||||||| | Sbjct 5635 CCGTTTTCGTCAGGAAATCATTCTTCTGGAAAAGTTGCATCGCGAACTGGCTTTCCTTCG 5694 Query 27659 CCCATGTCACCGTCTGTTCAGTCAATGCTCCACAGAATAACTGCTCCTGCTGTTTAACGA 27718 ||||||| || | || ||||||| || || | |||||| | ||||||||||| |||| Sbjct 5695 CCCATGTAACTGATTGGTCAGTCAGCGCGCCGCTAAATAACGGTTCCTGCTGTTTCACGA 5754 Query 27719 ATTCAACGAT 27728 |||||| ||| Sbjct 5755 ATTCAATGAT 5764 >seq36678 Length=505 Score = 113 bits (124), Expect = 1e-20 Identities = 279/416 (67%), Gaps = 12/416 (3%) Strand=Plus/Minus Query 31987 TAGGGATTAATGAATCGCAAATTTCGCGATGGAAAGACAGCTTTATCCCAAAGATGGCCA 32046 |||| |||| ||| ||||| | || |||||||| ||||||| ||||| | Sbjct 413 TAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTTATCCCTCGCATGGCGA 354 Query 32047 TGCTTCTGGCTGTGCTGGAGTGGGGTGTTGAAGACGAGGAATTAGCAAAGCTAGCAAAGA 32106 || | ||||| || |||||||||||| | |||||||| ||| | || || | || ||| Sbjct 353 TGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAGC 294 Query 32107 AAGTAGCCATGGTG--CTGACA---AAAGAAAAGCCTCAAGACTGCTGCAACAGTTTTGA 32161 | || ||| ||| || |||||||| | | || | |||| | ||| || Sbjct 293 GCCTGGC--TGGATATCTGTCACCAAAAGAAAACGCCCCGGAA-GTTGCAGC--TTTCGA 239 Query 32162 GGCCTGATGTAGAAAGACTGGATCAATCCACAGGAGTCATTATGACAAATACAGCAAAAA 32221 ||| |||| ||| ||||||||||| ||||||||| |||||| ||||||| || | Sbjct 238 GGCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAATACTGCTGAGG 179 Query 32222 TACTC-AACTTCTGCAGAGGTAACTTTGCCAAACAGGAGCGTAATGTGGCAGATCTCGAT 32280 || || || ||| | || ||| || | | |||||| | | ||||| ||| ||||| Sbjct 178 TAATCAAATTTCCGAAGCTTGAAC-CTGGCGAGCAGGAGAGAAGAGTGGCTGATATCGAT 120 Query 32281 GATGGTTACGCCAGACTATCAAATATGCTGCTTGAGGCTTATTCAGGCGCAGATCTGACC 32340 || || || || | | | || |||||| || ||| ||||||||||| | || Sbjct 119 GACGGATATACCCGTGTCGCTAACGAGCTGCTGGAAGCTATCGCAGGCGCAGATTTAACA 60 Query 32341 AAGCGACAGTTTAAAGTGCTGCTTGCCATTCTGCGTAAAACCTATGGGTGGAATAA 32396 ||| || || || || || | ||| | |||||||| || || | ||||| Sbjct 59 GCGCGGCAATTGAAGCTGATGATGGCCTACATCCGTAAAACATACGGCTTCAATAA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130093518093056