Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02]
36,804 sequences; 236,236,391 total letters
Query= NC_019714.1
Length=39026
Score E
Sequences producing significant alignments: (Bits) Value
seq36678 104 6e-18
seq22233 100 7e-17
>seq36678
Length=505
Score = 104 bits (114), Expect = 6e-18
Identities = 161/227 (71%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 28751 TAGGGATTAATGAATCGCAAATTTCGCGATGGAAAGACAGCTTCATCCCAAAAATGGGAA 28810
|||| |||| ||| ||||| | || |||||||| | ||||| |||| |
Sbjct 413 TAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTTATCCCTCGCATGGCGA 354
Query 28811 TGCTTCTGGCTGTTCTTGAATGGGGTGTTGAAGACGAGGAGTTGGCGGAACTGGCTAAGA 28870
|| | ||||| ||||| || |||||| | |||||||| || ||||||| ||||||||
Sbjct 353 TGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAGC 294
Query 28871 AAGTAGCCAGAATGCTGACA---AAAGAAAAAGCCCCGAAGAACGGCGAATTCTTCGAGG 28927
| || || ||| || |||||||| |||||| ||| | | | |||||||
Sbjct 293 GCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTGCAGCTTTCGAGG 237
Query 28928 CCTGATGTAGAAAGACTGGATCAATCCACAGGAGTAATTATGACAAA 28974
| |||| ||| ||||||||||| |||||||||||||||| ||||
Sbjct 236 CGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190
>seq22233
Length=1593
Score = 100 bits (110), Expect = 7e-17
Identities = 85/101 (84%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 34925 GGTAGTGAGATAAAAAGAGGCGGCGCTTACTACCGATTCCGCCTAGTTGGTCACTTCGAC 34984
||| ||||| ||||||||||||| || || ||||| ||||| ||||||| |||||| |
Sbjct 461 GGTGGTGAGG-AAAAAGAGGCGGCTCTCACCACCGAA-CCGCCAAGTTGGTAACTTCGTC 404
Query 34985 GTATCGTCTGGAACTCCAACCATCGCAGGCTGAGAGGTCTG 35025
| || | |||| ||||||||||| |||||||||||||||||
Sbjct 403 GCATTGACTGGGACTCCAACCAT-GCAGGCTGAGAGGTCTG 364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124707073254624
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |