Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq13651 158 3e-34 >seq13651 Length=3921 Score = 158 bits (174), Expect = 3e-34 Identities = 198/272 (73%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 42972 AAGGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAGAAAGCG 43031 ||||| || | ||||| || ||||| | || ||| | ||||||||||| || |||| Sbjct 3297 AAGGCTCTCGACTGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCTCAAAAAGTT 3238 Query 43032 GGTATAGCGTCATTTTGTCCCTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTT 43091 ||||| || ||||| ||||| | ||||| ||||| || || || ||| | || || ||| Sbjct 3237 GGTATCGCCTCATTCTGTCCGTGGAACATCGGCCCTGGAAAATGCTTCACCTCCACCTTT 3178 Query 43092 TATAAGCGGCTGAATGCCGGTGATCGTAAGGGTGCATGTGAGGCGATTCGCTGGTGGATA 43151 || ||| |||||| ||||| || || | ||||| || | || ||| | |||||| Sbjct 3177 TACAAGAAGCTGAACGCCGGCGACCGCATTGGTGCCTGCCGAGAAATCCGCCGCTGGATA 3118 Query 43152 AAAGATGGTGGGCGCGATTGCCGCATACGTTCAAATAACTGCTATGGACAGGTTATTCGT 43211 | || | ||| || ||||||||||| || || ||||||||||| || ||| | | || Sbjct 3117 TACGACGCTGGCCGAGATTGCCGCATCCGCTCGAATAACTGCTACGGGCAGATCGTACGG 3058 Query 43212 CGTGACCAGGAAAGCGCATTAGCCTGTTGGGG 43243 || || |||||| || | |||| || ||||| Sbjct 3057 CGCGATCAGGAAGCCGAACTAGCTTGCTGGGG 3026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142248203595456