Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq13651 158 4e-34 seq35447 100 8e-17 seq680 80.6 8e-11 >seq13651 Length=3921 Score = 158 bits (174), Expect = 4e-34 Identities = 171/224 (76%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 44780 GACCTGTGATCTGCCTGTTCCTGCTGATGTCGCTGGTGGGCTGCTCGAATACGCGCACCG 44839 ||| ||||||||| |||| ||||| | ||| ||||||||| ||||||| ||| ||||||| Sbjct 2738 GACGTGTGATCTGGCTGTGCCTGCCGCTGTTGCTGGTGGGTTGCTCGACTACACGCACCG 2679 Query 44840 TTTACGTGCCAGCGCAATGCACGCCGATACCGACGGACCTAACGCAGCCGATGATAGTAC 44899 | ||||| || |||||||| ||||||||| || || ||||| ||| || | | | Sbjct 2678 TCTACGTTCCCGCGCAATGTCAGCCGATACCATCGTCGCTGACGCAACCGGTGCTGGCGC 2619 Query 44900 CGCTGCCGCCGGCTCAATAACGTACTGCCAGGCTGTGCTCTGGATTAAGCCGCTGCTGGC 44959 | ||||| ||||| | | || ||||| ||||| ||||| |||||| | ||||||||||| Sbjct 2618 CACTGCCTCCGGCACCCTGACATACTGTCAGGCGGTGCTGTGGATTGATCCGCTGCTGGC 2559 Query 44960 CGTGATTGAGAAGGGCAACAATAACCTGGCTGGC-ATACGGCAG 45002 | | | || || | ||||| | || |||||| ||||| ||| Sbjct 2558 GGCGCTCGACAAAGCGAACAACCAACT-GCTGGCGATACGCCAG 2516 >seq35447 Length=555 Score = 100 bits (110), Expect = 8e-17 Identities = 163/229 (71%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 33552 AGCAGGGAAACACAGGATGCCAGACCCATCTGTGTTAGCTCCAACGCGGCGGAGGGTTGC 33611 |||||||||||| || | || ||| | | ||| || || ||||| || || || || Sbjct 554 AGCAGGGAAACATAGAA---CACTCCCTT-TCTGT--GCGCCCACGCGCCGTAGTGTAGC 501 Query 33612 CTTTGAGAACCTGAGCTTAAAACCATTGTGATCTTCG-CTGTGTACGCGTCCATCGCCAC 33670 ||| ||||| | | | | || || || | |||||| || || | ||||| || | Sbjct 500 CTTCGAGAATCGCAACGTGAAGCCGTTATAGTCTTCGTCTCCATAA-CTCCCATCACCGC 442 Query 33671 ACGCAAATTCAATATCCTTAAGAAATGGCACTTCAACCTCATCAACAGGAAGCGGGGTGT 33730 | || | ||| ||||| || |||||||||||||| ||||||||| | || | ||| ||| Sbjct 441 AGGCCAGTTCTATATCTTTTAGAAATGGCACTTCCACCTCATCATCGGGTAACGGTGTGC 382 Query 33731 CTTTATCCCATGCATCAACAACTCCCCACTCAGACTCTGGCGGGATGTT 33779 ||||||| || || ||| |||||| ||| ||||| |||||||| Sbjct 381 TGCTATCCCAGGCGTCTACAGTTCCCCATTCATTTTCTGGTGGGATGTT 333 >seq680 Length=42727 Score = 80.6 bits (88), Expect = 8e-11 Identities = 107/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 10466 AAGGCCGGTATTTCAGTGGGTCAGTATAACGCCGCAATGCGTATGCTCCCGGCGCAGTTT 10525 || ||||||||||| || || ||||| ||| || ||||| ||| ||||| | Sbjct 1619 AAAGCCGGTATTTCTGTCGGCCAGTACCGCGCAGCGATGCGGCAGCTTGGCCCGCAGATC 1678 Query 10526 ACCGATGTGGCCACGCAGCTGGCAGGTGGGCAGAACCCCTGGCTGATTCTGCTTCAGCAG 10585 ||||| | | ||||||||| ||| ||||| ||||| | ||||||| | |||||| Sbjct 1679 ACCGACATCGTAACGCAGCTGCAAGGCGGGCAAAACCCGTTTACGATTCTGGTGCAGCAG 1738 Query 10586 GGTGGTCAGGTTAAGGACTCCTTTGGCGG 10614 || || ||| | || |||||||| || || Sbjct 1739 GGCGGCCAGATCAAAGACTCCTTCGGGGG 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144986206434944