Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq16589 87.8 5e-13 >seq16589 Length=2855 Score = 87.8 bits (96), Expect = 5e-13 Identities = 104/136 (76%), Gaps = 10/136 (7%) Strand=Plus/Minus Query 21473 ACACGCGTGATTTAAAATCCCTCGGCGTTCGCGCTGTGTGGGTTCAAGTCCCACTCCGGG 21532 |||| | |||||||||||||||||| | | |||||| ||||||||||||| | ||||| Sbjct 819 ACACAAGGGATTTAAAATCCCTCGGCTTATG-GCTGTGCGGGTTCAAGTCCCGCCCCGGG 761 Query 21533 TACCATGGGA--AAACTA--GAATA---AAATCAATGATAAGCAGTGTCGTATAAACCAC 21585 ||||| || | ||| || ||||| ||| |||| | || | ||||| || ||| | Sbjct 760 TACCAGGGAACGAAAATACCGAATAATCAAAGCAATAAGTAGTAATGTCG--TAGACCGC 703 Query 21586 CGAAAGGTGGtttttt 21601 ||| ||| |||||||| Sbjct 702 CGAGAGGCGGTTTTTT 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127915270506968