Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019724.1 Length=43741 Score E Sequences producing significant alignments: (Bits) Value seq680 156 1e-33 >seq680 Length=42727 Score = 156 bits (172), Expect = 1e-33 Identities = 433/663 (65%), Gaps = 32/663 (5%) Strand=Plus/Plus Query 690 CCGCACCAGGTCGAACTACTGCGCGACACAAAGACTAAAATACTTGGCCTGTGTTCCGGC 749 ||||||||| |||| |||||| |||| | ||| ||||| || |||||||| || ||| Sbjct 33341 CCGCACCAGTTCGACCTACTGGAAGACATCACGACGAAAATTCTCGGCCTGTGCTCGGGC 33400 Query 750 TTCGGTGGTGGAAAGTCGTGGGTCGCTGCGCGTAAGGTCATCCAGCTTTTAACCCTGAAC 809 | || || || || | |||||||| | |||||| | |||||||| | | |||| Sbjct 33401 TATGGCGGCGGTAAAACTTGGGTCGCGGTGCGTAAAGCGATCCAGCTGATGATTTTGAAT 33460 Query 810 CCGGGTCATGATGGCATCGTTACAGAACCGACTATTCCCCTCCTGGTTA---AAATCATG 866 ||||| || || || |||| |||||||| | || ||| | | | | | Sbjct 33461 CCGGGGTGCGACGGTATGATTACCGAACCGACG---CACCCACTGTTAACGCAGGTGCTT 33517 Query 867 TATCCAGAATTGGAGAAGGCTTTCGACGAGGCTGGCTTCCGGTGGAAGTTCAACAAGCAG 926 ||||| ||| | || | ||| | || ||| ||| | || | ||||| |||||| | Sbjct 33518 TATCCCGAACTTGAAACGGCGCTTGATGAGTACGGCATTCGATACAAGTTTAACAAGGTG 33577 Query 927 GACAAGATCTATAGCGTTCTGGT----------GAAAGGCAAATGGACCCGCG------- 969 || ||||| | || ||| |||| |||| | | | | |||| Sbjct 33578 GAGAAGATTTTTA-CGTGCTGGGTTTGGGATGAGAAAATCCAGCGCAACCGCCGCACACG 33636 Query 970 --TGATCTGTGAATCAATGGAGAACTATACCCGTCTGATCGGGGTCAACGCCGCGTGGAT 1027 | ||||||| ||| ||||| ||||||| || | |||| || |||||||||||| Sbjct 33637 TATCATCTGTGCATCGATGGAAAACTATAAACGCTTAGTCGGTGTTAACGCCGCGTGGTG 33696 Query 1028 TGTTGCCGACGAGTTCGACACCACGAAGCAAGACGTCGCA---ATGGCGGCTTATCACAA 1084 ||| ||||||||||||||| || | | ||||||||| |||||| | || Sbjct 33697 TGTGATGGACGAGTTCGACACCTCGGCGGAGGACGTCGCATATATGGCG---TTCGTGAA 33753 Query 1085 ATTGCTCGGTCGTCTGCGTGCGGGCGTGGTCCGTCAGTTTGTCATCGTATCCACGCCGGA 1144 | |||| |||||||||||| || || || ||| | | || || ||||| || || Sbjct 33754 ACTGCTGGGTCGTCTGCGTCGCGGTAAAGTGCGCCAGATGATTATTGTGTCCACACCTGA 33813 Query 1145 AGGCTTCCAGGCAATGTATCAAATTTTCGAGGTGGAGAAGGATAGCCAGAAACGTTTGAT 1204 ||| |||| || ||||| | || |||| ||| ||| ||| || | || Sbjct 33814 AGGTTTCCGCGCGATGTACCGCATCTTCGTCACTGAGTTGGACGAGATGAAGCGGCTTAT 33873 Query 1205 CCGGGCGAAGACCACCGACAACCACCATTTACCGGCAGACTTTATCGACACGCTGCGCAG 1264 | |||||||| |||||||| ||| | |||| ||||| |||| | ||||| | Sbjct 33874 CAAAGCGAAGACGCGCGACAACCCGCATCTGCCGGAAGACTATATCAAGACGCTCGAAAA 33933 Query 1265 TCAGTACCCGGCTAACCTGATCGACGCGTACCTGAACGGCCTATTTGTTAACCTTACGTC 1324 || ||| || | || | || |||||||| |||||| || || ||| | ||| | Sbjct 33934 ACAATACTCGAAAGAGTTGGTAGAGGCGTACCTAAACGGCGAGTTCGTCAACATGACGGC 33993 Query 1325 GGG 1327 ||| Sbjct 33994 GGG 33996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139788479081944