Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq36678 107 5e-19 >seq36678 Length=505 Score = 107 bits (118), Expect = 5e-19 Identities = 169/239 (71%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 28389 TTGCTGATGCGTTAGGGATTAATGAATCGCAAATTTCGCGATGGAAAGACAGCTTCATCC 28448 |||| | ||| |||| |||| ||| ||||| | || |||||||| | |||| Sbjct 425 TTGCAGCTGCAGTAGGTGTTAACCCATCTCAAATCACACGCTGGAAAGAGTCTCTTATCC 366 Query 28449 CAAAAATGGGAATGCTTCTGGCTGTTCTTGAATGGGGTGTTGAAGACGAGGAGTTGGCGG 28508 | |||| ||| | ||||| ||||| || |||||| | |||||||| || |||||| Sbjct 365 CTCGCATGGCGATGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGG 306 Query 28509 AACTGGCTAAGAAAGTAGCCAGAATGCTGACA---AAAGAAAAAGCCCCGAAGAACGGCG 28565 | |||||||| | || || ||| || |||||||| |||||| ||| | | Sbjct 305 AGTTGGCTAAGCGCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTG 249 Query 28566 AATTCTTCGAGGCCTGATGTAGAAAGACTGGATCAATCCACAGGAGTAATTATGACAAA 28624 | |||||||| |||| ||| ||||||||||| |||||||||||||||| |||| Sbjct 248 CAGCTTTCGAGGCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124508759964848