Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2779 147 1e-29 seq1817 138 7e-27 seq12857 132 3e-25 seq121 114 8e-20 seq233 109 4e-18 seq1592 107 1e-17 seq809 107 1e-17 seq2796 100 2e-15 seq8564 86.0 4e-11 >seq2779 Length=20704 Score = 147 bits (162), Expect = 1e-29 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || ||||||||||| ||| || | ||| ||||| | ||||| Sbjct 8610 ACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGT 8669 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| |||||| || || ||||| ||||| || || || || |||||||| ||||| || Sbjct 8670 TCTGCCATCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTGGAATGCC 8729 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| ||| ||| || ||||| |||| | ||||| Sbjct 8730 TTCCTTGTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTACCTCAAG 8789 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || |||||||| || ||||| ||||| Sbjct 8790 GGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTG 8828 Score = 134 bits (148), Expect = 9e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || |||||||| || ||| || | ||| ||||| | ||||| Sbjct 8382 ACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGT 8441 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| |||||||||||| || ||||| ||||| ||||| || ||||| || |||||||| Sbjct 8442 TCTGCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGGAATTCC 8501 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 || ||||| || || || || ||| ||| || ||||| | | | |||||| Sbjct 8502 CTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAACTTCAAG 8561 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || ||||||||||| || || || || Sbjct 8562 GGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTG 8600 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||| || | || | ||||||||| ||| || || ||||||||| | |||||| Sbjct 8155 CGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAAAGAGTT 8214 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| || ||||| || |||||||| |||||||| ||||| |||||||||||| Sbjct 8215 CTGCCATCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCT 8274 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| || || ||| ||| || || || || || | | |||||| Sbjct 8275 TCTTTGTCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACTTCAAGA 8334 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||| || || ||||| || || || || || Sbjct 8335 GTAATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTG 8372 >seq1817 Length=26970 Score = 138 bits (152), Expect = 7e-27 Identities = 382/583 (66%), Gaps = 21/583 (4%) Strand=Plus/Plus Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695 || |||| ||||||| ||| ||| | | | |||| |||| | || ||| ||| | Sbjct 6124 AAGAACAGTTGAACCAGTTCGTAAAGCTTTAAAAGATGCTAACTTAGATAAAGATCAAAT 6183 Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTC 475755 ||||| | || | || || |||||||||||||||||| | || | ||||| || Sbjct 6184 TGATGAAGTACTTTTAGTTGGTGGTTCAACAAGAATTCCAGCAGTACAAAAAATGATTAA 6243 Query 475756 ATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATA 475815 | || || || ||| | ||| | | || || |||||||||| ||||| | Sbjct 6244 AGAATTACTT---GGAAAAGAACCAAACAAGACAGTTAACCCTGATGAAGTAGTTGCTTG 6300 Query 475816 TGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATAT 475875 |||||||||| | |||| | || ||||||| ||| | | || || | Sbjct 6301 TGGAGCTGCTATTCAAGGTGGAATCCTATCAGG------AGATG------TTAAGGATTT 6348 Query 475876 TGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGAC 475935 |||| | || ||||| || || |||||||| ||||||| | || || ||||||| Sbjct 6349 ATTACTATTAGATGTAACACCTCTATCATTAGGAATTGAAACTTTAGGTGGTGTTATGAC 6408 Query 475936 TAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTA 475995 | | ||| | | ||||| | || ||| | |||||| |||| ||||| ||| Sbjct 6409 AGTTTTAATTAAACGTAATACAACAATACCAACTAGAAAATCTCAAGTTTTTTCAACTGC 6468 Query 475996 TTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAA 476055 | ||||||||| || |||| ||| || | || ||||||||||| | ||| Sbjct 6469 TGAAGATAATCAACCAGCTGTTGACATTCATGTTTTACAAGGTGAAAGAGCGATGGCTAG 6528 Query 476056 AGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGT 476115 ||||||| | | | || | || | | ||| || || || || | ||| | Sbjct 6529 AGATAATCATAGTTTAGGTAGATTCCAATTAACTGGTCTTAAACCAGCACCAAAAGGTAT 6588 Query 476116 TCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTG 476175 || |||||||||||| ||||||||||||||| ||||||||| || ||||| ||| Sbjct 6589 GCCACAAATTGAAGTTGGTTTTGATATTGATGCTAATGGTATTGTTTCAGTTACAGCTAA 6648 Query 476176 TGAT---AAATCTAGTAACAAGAGTAAAAATATAACTATTACA 476215 ||| ||| | | || |||| ||||| ||||| ||| || Sbjct 6649 AGATTTAAAAACAAATA--AAGAACAAAAA-ATAACAATTTCA 6688 Score = 107 bits (118), Expect = 1e-17 Identities = 130/174 (75%), Gaps = 5/174 (3%) Strand=Plus/Plus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || || ||||| || || ||||||||| ||| | |||||||||||||||| Sbjct 5606 GCTGTTATCACAGTTCCTGCTTACTTTAATGATCAACAAAGAAAAGCAACTAAAGATGCT 5665 Query 474797 GGAAGAATTGCAGGTCTTAA-TGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACT 474855 || || || || ||||| ||| | | |||||||||||||||||||| || ||| | Sbjct 5666 GGTGTTATAGCTGG-CTTAACAGTTGAAAGAATTATTAATGAACCAACAGCTGCTGCAAT 5724 Query 474856 TGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 |||||||||| | ||||| | |||| |||||| || ||||| | ||||| Sbjct 5725 TGCTTATGGTTTAGATAAAA---CTGATAAAGAACACAAAATTTTAGTATTTGA 5775 >seq12857 Length=4317 Score = 132 bits (146), Expect = 3e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | || || | ||| || ||| ||| || || ||| ||||||| || || Sbjct 3823 ACGAAGCCTCAGAACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGT 3882 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||| |||||||||||||| | | |||||||| ||||| || || Sbjct 3883 GCGACCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCC 3942 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||| ||||| ||||| || ||||||| |||||| ||||| | || | | || ||| Sbjct 3943 TTCTTTGTCCTGAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAA 4002 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||||||||||||||| |||||||| || Sbjct 4003 -TGTGATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTG 4041 Score = 114 bits (126), Expect = 8e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 480554 AAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 |||||||||||||||||| |||||| |||||| || ||||||||| | | ||| | Sbjct 3598 AAGACGGAGTACAAGATGTAGTGTAGATTCTTTCTGAATATTATAATCTGACAAAGTACG 3657 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 || || || ||||| || || ||||| || | ||| |||||||||||||| || || Sbjct 3658 TCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGAATGCCCTC 3717 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGG 480732 ||||||||||| || || ||| || || ||||| | | | | | ||| | Sbjct 3718 TTTGTCTTGAATTTTAGCCTTTACATTCTCGATCGTATCCGAAGCCTCTACCTCCAA-AG 3776 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||| || || | ||| || ||||||||||| Sbjct 3777 TGATAGTTTTTCCTGTCAAAGTTTTGACGAAAATTTG 3813 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || | ||| | || ||| || || ||| ||||||| || || Sbjct 4051 ACGTAGACGAAGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAGAAAGCGT 4110 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| ||||| ||||| ||||| || | | || ||||| ||||| || || Sbjct 4111 GCGACCATCTTCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGGATACC 4170 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||| || ||||| || ||||||| || || ||||||| || | | || ||| Sbjct 4171 TTCCTTATCCTGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGACTTCCAA 4230 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | || |||||||||||||||||||| |||||||| || Sbjct 4231 TG-TGATGGTTTTACCGGTGAGAGTCTTGACGAAAATCTG 4269 >seq121 Length=74473 Score = 114 bits (126), Expect = 8e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 |||||||||| ||||| | |||||| || || ||||||||||| ||||| || || Sbjct 8132 TTATAATCAGAGAGAGTACGTCCATCTTCCAGCTGTTTTCCAGCAAAGATAAGTCGCTGC 8191 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || |||||||| || || || |||||||| ||| ||| ||| || |||||| Sbjct 8192 TGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTGGCTTTCACATTTTCGATGGTATCA 8251 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || || ||||| |||||||| ||||| || || |||||||| || Sbjct 8252 GAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGTGAGGGTTTTGACGAAAATCTG 8307 >seq233 Length=61284 Score = 109 bits (120), Expect = 4e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 |||||||||| ||| || ||||| |||||||||||| | |||||||| |||||||| | Sbjct 32049 TAGATTTTTCCAGTCCCAACATTGCCAAGGAAATGCATGTGGGACACTTAAGATCTACTA 32108 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 ||||||| || | ||| || ||| |||| | ||| || ||| ||| | | Sbjct 32109 TAATTGGAGATAGTATTTCAAGGCTATTAGAATACTTAGGACACGACGTATTGAGACTCA 32168 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 |||| || || || ||||| ||||| |||||||||||||| || Sbjct 32169 ATCACATAGGCGACTGGGGTACACAGTTTGGTATGTTAATAGC 32211 >seq1592 Length=29089 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| || || ||||| | | || ||||| |||||||| ||||| ||| Sbjct 31 TCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGAATGCCTTCTTTG 90 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 |||||||| || ||||||| ||||| ||||||| || | | || ||| || || Sbjct 91 TCTTGAATTTTGGCTTTGACATTCTCAATCGTATCAGATGCCTCGACTTCCAA-TGTGAT 149 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||||||||||||||| |||||||| || Sbjct 150 GGTTTTACCGGTGAGAGTCTTGACGAAAATCTG 182 >seq809 Length=39806 Score = 107 bits (118), Expect = 1e-17 Identities = 191/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697 || ||||| ||| || | || ||| | || || ||||||||||| |||| ||||| Sbjct 35978 GGCGAAACGAAATCTTTCTTCCCCGAAGAGATCTCCTCAATGGTTTTGACCAAGATGAAG 35919 Query 474698 CAAACCGCG--AGCTCATATCTTGGACA-AGAAGTAACTGATGCAGTAATTACTGTTCCA 474754 |||| ||| |||| || |||| || || | | | || || || || ||||| Sbjct 35918 GAAACTGCGGAAGCTTAT---TTGGGCACAGCCATCAGGAACGCCGTGATCACGGTTCCG 35862 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 || || || || |||||||||||||| || || || || ||||| | || || | || Sbjct 35861 GCGTACTTCAACGATTCTCAACGTCAGGCGACGAAGGACGCGGGCACTATCGCCGCCCTG 35802 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 ||||| || | || ||||| || || || |||||||| | ||||| || ||||| || Sbjct 35801 AATGTCCTAAGGATCATTAACGAGCCGACCGCAGCCGCCATCGCTTACGGACTTGACAAA 35742 Query 474875 AATTCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 || | || | ||| |||||| | ||||| ||| Sbjct 35741 AAGGGTCACGATGAAAGGAATGTTCTGATCTTCGAT 35706 >seq2796 Length=20616 Score = 100 bits (110), Expect = 2e-15 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||||| |||| || ||||| || ||||||||||| |||||||| ||||| |||||||| Sbjct 17346 AGTAAAGAATGCTGTTATTACCGTACCAGCATATTTCAATGATTCACAACGACAAGCAAC 17405 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 || ||||| || || || || | ||||| | || | || |||||||| || || Sbjct 17406 AAAGGATGCTGGTCAGATAGCTGGATTGAATGTGCTTCGGGTAATAAATGAACCGACTGC 17465 Query 474847 AGCCGCACTTGCTTATGG 474864 ||| |||||||| ||||| Sbjct 17466 AGCTGCACTTGCATATGG 17483 >seq8564 Length=7362 Score = 86.0 bits (94), Expect = 4e-11 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 593113 AGTACCCGCATTAAATAAAGTTGGAGTTGCATGAGTAAAATATCCTTCTGATAACATTTC 593172 ||||| || ||||||| ||||| | ||||| |||||||||| ||| ||||| | Sbjct 6921 AGTACAGGCGTTAAATAGCGTTGGTGAAGCATGCGTAAAATATCGTTCGGATAAATAGTT 6862 Query 593173 ATATGTTTCAAAAATTTTAGATAAATTGCCTGTTCTATAATGTAGTGCAATAGCTACTCG 593232 |||||||| | || ||| | ||| | ||||| ||| | ||| |||||||| Sbjct 6861 GTATGTTTCTATAACTTTG--TCAATGTC--GTTCTC--ATGAATACCAACAGCTACTCT 6808 Query 593233 CATCCATAAATGTTGAGGTCTTTCTACAATCATACCATTACATTTTTTG-AGATAACTTC 593291 |||| | | ||||||||||| ||||| ||| | ||||| ||||| | || || |||| Sbjct 6807 CATCAACATGTGTTGAGGTCTCTCTACTATCTTGCCATT-GATTTTCAGCAGGTAGCTTC 6749 Query 593292 TTTCAAGAGTTCTATACCCAA 593312 | ||||| || || | |||| Sbjct 6748 TCTCAAGTGTCTTAAAACCAA 6728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266600497866992