Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq680 122 8e-23 >seq680 Length=42727 Score = 122 bits (134), Expect = 8e-23 Identities = 161/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 73178 ATTAGGGATATTGCTTAAATGGAAGCTGGAAGTGTGGACCATCCTTAAAGGTGGTCCAGT 73237 |||| || |||| ||| | || | |||||||||||| || || || || || |||| | Sbjct 32785 ATTATGGGTATTCCTTCCACGGTAACTGGAAGTGTGGCCCGTCTTTGAACGTCTTCCAAT 32726 Query 73238 CACCGCCCCACTCAAGCGGTACGCCGAGTTCCTTCGCTGCTGCCTTCATAGCA-TCCGCC 73296 | ||||||||||| | ||| ||| ||||| ||||| || |||||| ||| || ||| Sbjct 32725 CGCCGCCCCACTCGATCGGCACGTTCAGTTCTTTCGCCGCCTGCTTCAT-GCACTCGGCC 32667 Query 73297 AGAGGATAGTAATACTTCCAATCCCAACTGACTTTG--CCATCAACCAGAGGCCAAAGAT 73354 | ||||| ||||| ||||||||||| |||| || ||||| || || ||||| | | Sbjct 32666 AACGGATAATAATATTTCCAATCCCA--TGACACTGCACCATCGACAAGCGGCCAGATGT 32609 Query 73355 CCACTGCGTGGCCTGTCAAGTGACGACTATTCATCGTCT 73393 | || |||||||| || | ||| || ||||| |||| Sbjct 32608 CGACAGCGTGGCCGGTGAGGTGGCGCGAGTTCATTGTCT 32570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455179298382560