Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4290 82.4 9e-11 >seq4290 Length=14807 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || |||||||| | ||| || || |||||||| || ||||||||||| ||||| || Sbjct 5227 ACTCCGATAGGACCCATGCCGGGTCCGCCACCTCCGTGAGGAATACAGAACGTCTTGTGC 5286 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || ||||| | ||||| || ||||| | ||| | || || || ||| Sbjct 5287 AAGTTGAGATGTGACACATCGCTGCCGTAGTCGCCGGGTCGGCACAAGCCGACTTGAGCA 5346 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || || || || |||||||| || || | || || || | |||||| Sbjct 5347 TTCATATTAGCGCCGTCCAGGTATACCTGCCCGCCGGCACCGTGCACCATGTCACATATG 5406 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | | || | || ||||| || | ||||| ||||| || ||||| Sbjct 5407 TCGCCAATTGTCTCCTCGAATACTCCGTTTGTCGACGGATACGTGATCAT 5456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578732031786080