Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020850.1 Length=38374 Score E Sequences producing significant alignments: (Bits) Value seq13651 98.7 2e-16 >seq13651 Length=3921 Score = 98.7 bits (108), Expect = 2e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 30847 TTGTCAAATTTAGGTGTTCCGAATTCATCAAGCTTTTGTGCAATATGAAAAAGCTCGTGC 30906 |||| ||||| |||| ||||| || || || || || || ||||||| ||| Sbjct 1704 TTGTTGAATTTCGGTGCGCCGAAATCGTCTGTTGCCTGCGCGATGTGGTAAAGCTCATGC 1763 Query 30907 TCTACCAGTGAGCAAAATTCAACATTTGAGCAATGATTGCAGTATTCGGCGGATAGGGTA 30966 || | ||| | |||||| ||| ||| || || || |||||| ||||| | || || Sbjct 1764 TCGATCAGGGCGCAAAACTCAGCATCAGAACACTGTGAGCAGTAGTCGGCAGCCAGCGTG 1823 Query 30967 ATTATAAACTTCGGAACGTAGCCAAACCATTCAAACACTTGTTGTTCCATTCTGGCTTTT 31026 || || || ||||| || | ||| ||||| ||| ||| || |||||||||||||| || Sbjct 1824 ATGATGAATTTCGGCACCTCGCCGAACCACTCACACATCTGCTGTTCCATTCTGGCCTTC 1883 Query 31027 TTCCATCCACCAGC 31040 | ||| ||||| || Sbjct 1884 TGCCAGCCACCGGC 1897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122621585110528