Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq3434 87.8 7e-13 >seq3434 Length=17783 Score = 87.8 bits (96), Expect = 7e-13 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 44747 GAATAGCGGGCTGAGTATTCATTCACGTTGGCCGTCCGGTGACGGATCCATTGGCGGGCC 44806 || || ||||| || |||||||||||| ||||| | || || || | ||| || || || Sbjct 8912 GAGTAACGGGCAGAATATTCATTCACGCTGGCCATACGATGCCGAAGCCACTGACGCGCA 8853 Query 44807 ACAAACACGGGCAGTTTGACATGAAGTTTGATCTCACAACCCTCAAACGGGCTGGTGTGC 44866 ||||| | |||| |||||| |||| ||| || ||||| || || ||| | || || Sbjct 8852 ACAAAAATCGGCATTTTGACGTGAAATTTAATTTCACACATTTCGAAAGGGGTCGTATGA 8793 Query 44867 CAATGGCGCATAAGGTAGCGGATTAG 44892 | |||||||| | |||||||| || Sbjct 8792 CGGTGGCGCATCAAATAGCGGATGAG 8767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182064394420160