Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq10785 217 7e-52 >seq10785 Length=5498 Score = 217 bits (240), Expect = 7e-52 Identities = 539/808 (67%), Gaps = 25/808 (3%) Strand=Plus/Minus Query 65073 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65132 |||||||||| | | || || |||||||||| ||| || || | |||||| Sbjct 4421 CCACCGGCTCACTGTCACTCGATATCGCTCTGGGCGCCGGCGGCCTGCCAATGGGCCGCA 4362 Query 65133 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 65192 | || ||||| |||||||| ||||| || || || | |||||| || || | | | | Sbjct 4361 TCGTCGAAATTTACGGCCCGGAATCCTCCGGTAAAACCACTCTGACGCTGCAGGTGATCG 4302 Query 65193 CCAATGCGCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCTGAGCACTCCCTGG 65249 || |||||| || ||||| || || | |||||| || |||||| | |||| Sbjct 4301 CCGCCGCGCAGCG---CGAAGGCAAAACCTGTGCGTTCATCGATGCCGAGCACGCGCTGG 4245 Query 65250 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC-AGCCG 65308 | ||| || || || ||| || || || |||||||||| || || | | ||||| Sbjct 4244 ATCCTATCTATGCGAAAAAGCTGGGCGTCGATATCGACAACCTGCTG-TGCTCCCAGCCG 4186 Query 65309 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 65368 ||||| ||||||||||| ||||| ||| ||| || | || |||| | | | Sbjct 4185 GACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGACCCGCTCCGGCGCGGTTGAC 4126 Query 65369 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 65428 || || |||| ||||| |||||||| ||| |||| || || ||||||| || ||| Sbjct 4125 GTCATCATCGTCGACTCCGTGGCGGCGCTGACGCCGAAGGCGGAAATCGAAGGTGAAATC 4066 Query 65429 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 65488 || || ||| | || || ||||| | ||| ||||| ||||| ||||| || Sbjct 4065 GGCGATTCGCACATGGGGTTGGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCC 4006 Query 65489 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 65548 |||| | | | | |||| || ||| | ||| |||||||| | || ||| || Sbjct 4005 GGCAACCTGAAAAACGCCAATACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATT 3946 Query 65549 GGCAACGTGGGCTACGG---CCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 65605 || ||| | ||| |||| || ||||| || ||||| || || ||| |||| Sbjct 3945 GG---TGTGATGTTCGGCAACCCG---GAAACCACGACCGGCGGTAACGCCCTGAAGTTC 3892 Query 65606 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCT 65665 ||||| || || || ||||| ||||||| |||| | || || |||||||| || | Sbjct 3891 TACGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAAAGAAGGCGACGAAGTG 3832 Query 65666 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 65725 || |||| | ||||| ||||| || || |||||||| | || ||||| | | Sbjct 3831 GTGGGCAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTCAAACAG 3772 Query 65726 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 65785 || |||||| || ||||||| || |||||| | | |||||| |||| ||| Sbjct 3771 GCTGAGTTCCAAATCATGTACGGCGAAGGCATCAACAGCCGTGGCGAACTGGTCGATCTG 3712 Query 65786 GCCGTGTCGCAGGGCCTGGT-GAAGAAGTCGGGCGCCTGGTTCA---AGTACGGGGACAA 65841 | |||| ||| || | ||| ||| | |||||||||| || | |||| || || Sbjct 3711 GGCGTGAAGCACAAGATGATCGAAAAAG-CCGGCGCCTGGTACAGCTATAACGGCGAGAA 3653 Query 65842 GAACGTCGCTCAGGGCAAGCCCAAGGCC 65869 || ||| |||||||||| | || ||| Sbjct 3652 GA---TCGGTCAGGGCAAGGCGAATGCC 3628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242121747856868