Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq34550 196 9e-46 >seq34550 Length=593 Score = 196 bits (216), Expect = 9e-46 Identities = 253/347 (73%), Gaps = 2/347 (1%) Strand=Plus/Minus Query 23474 TTGGTAAGCATCTGGCCGTCCCTCGCTGGCAGGAG-ACATGCGATTATTATAATCAGATG 23532 |||| ||| || |||| |||||||||| || || || ||||||| ||||||||||||| Sbjct 347 TTGGGGAGCGCCTCGCCGCCCCTCGCTGG-AGAAGCACCTGCGATTTTTATAATCAGATG 289 Query 23533 ATGGAACGCGAACGGCTAACGGTTTGCTTCCATGCGCAGTTAAAACAGCGTCACGCAACG 23592 ||||| ||||| || || || | || ||||||||||||||||||||||| || || Sbjct 288 ATGGAGCGCGAGCGCCTGACCATCTGTTTCCATGCGCAGTTAAAACAGCGGCATGCTGTT 229 Query 23593 ATGCGTTTTGAAGAAATGAACGACGTCGAACGTGAACGGCTGGTTTGTGCAATTGATGAA 23652 ||||| || || |||||||| ||| ||| || || || || || || || ||||||||| Sbjct 228 ATGCGATTAGAGGAAATGAATGACAGCGAGCGCGAGCGTCTTGTGTGCGCCATTGATGAA 169 Query 23653 TTGCGTGGGGCATTCTCAAAACGTCGTCAGGTCGGTGCAAGTGAGTATGCATATATTAGT 23712 | || | || ||| | | |||| || |||| ||| | | || || ||| | Sbjct 168 CTTCGCAGCGCTTTCGCTACTTATCGTAAGCACGGTATCAGTAAATCTGGATTCATTGGC 109 Query 23713 TTTTTAACAGTCAGTCAGCGCCGTACTTTATTTATGCACGCACGACTGACAGAAAAAGAA 23772 |||||| | || || ||||| |||||||| |||| || | || || || || Sbjct 108 CGATTAACAATAAGCCAACGCCGCACTTTATTCCTGCATGCCGGGCTAACTGAGGTCGAG 49 Query 23773 TTTAACCAGCCATACTGGCGAATTAATGAAGAGTCATGTTACTGGCG 23819 ||||| ||||| |||||||| ||| |||| ||||| ||| | ||||| Sbjct 48 TTTAATCAGCCGTACTGGCGGATTGATGATGAGTCCTGTAAATGGCG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95011257411392