Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1963 105 8e-17 >seq1963 Length=25931 Score = 105 bits (116), Expect = 8e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1592164 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCT 1592223 ||| ||||| || ||||| || || || ||||| || ||||||||| |||| | ||| | Sbjct 23384 CACTCTCTTCGAATTGATTCTGGCAGCTAACTATCTTGACATCAAGGGTCTGTTGGATGT 23325 Query 1592224 TGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGAC 1592283 ||||| |||| ||||| |||||||| |||||| | ||||||||||| || || || Sbjct 23324 CACATGCAAAACTGTCGCCAATATGATCAAAGGCAAGACACCCGAGGAGATTCGTAAAAC 23265 Query 1592284 CTTTAACATCAAG 1592296 || ||||||||| Sbjct 23264 ATTCAACATCAAG 23252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104118891406868