Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2779 203 3e-47 seq1592 134 1e-26 seq121 123 2e-23 seq12857 111 1e-19 seq5929 93.3 4e-14 >seq2779 Length=20704 Score = 203 bits (224), Expect = 3e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || ||||| ||||| || ||||| ||||| | Sbjct 8375 ATGCAGATCTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTCA 8316 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | |||||| ||| ||||| |||||||||||||| ||||||||||| Sbjct 8315 GACACCATCGAGAACGTAAAAGCAAAAATCCAGGACAAAGAAGGAATTCCTCCCGATCAG 8256 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || |||||||| || |||||||| ||| |||| | || |||||||| Sbjct 8255 CAACGTCTCATTTTTGCCGGTAAGCAGCTGGAAGATGGCAGAACTCTTTCCGATTATAAT 8196 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| ||||| ||||| || |||||| | |||||||| Sbjct 8195 ATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGCGGAGG 8149 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || || || ||||| || || || || |||||||| | Sbjct 8831 ATGCAAATCTTCGTGAAAACTCTCACTGGGAAAACCATCACCCTTGAGGTAGAAGCTTCT 8772 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| |||| | || ||| ||||| |||||||| ||||| || || || ||||| Sbjct 8771 GACACTATAGAGAATGTTAAAGCCAAGATTCAAGACAAGGAAGGCATTCCACCTGATCAG 8712 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| ||||||||||| ||| |||| | || ||||| || Sbjct 8711 CAGCGCCTGATCTTTGCCGGAAAACAGCTGGAAGATGGCAGAACTCTTTCCGATTACAAT 8652 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| ||||| || |||| |||| | || ||||| Sbjct 8651 ATCCAGAAGGAATCCACACTTCATCTGGTCCTGCGTCTTCGTGGAGG 8605 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || ||||| || || || ||||| ||||| | Sbjct 8603 ATGCAGATCTTTGTAAAGACTCTCACAGGCAAAACCATCACCCTTGAAGTTGAAGCTTCA 8544 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||||| || || || ||||| |||||||| ||||| || || ||||| Sbjct 8543 GATACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCGGATCAG 8484 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || || || ||||| || || ||| |||| | || ||||| || Sbjct 8483 CAGCGTCTGATTTTCGCTGGCAAACAACTTGAAGATGGCAGAACTCTTTCCGATTACAAT 8424 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| || || || |||| |||| | || ||||| Sbjct 8423 ATCCAGAAGGAATCCACGCTTCATCTGGTCCTGCGTCTTCGTGGAGG 8377 >seq1592 Length=29089 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || || ||||||||||| | |||||||| || | Sbjct 413 ATGCAAATTTTCGTCAAAACCTTGACGGGAAAAACTATTACTTTGGAAGTAGAGGCTTCA 354 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || |||||||||||||| || ||||| ||||| Sbjct 353 GATACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGCATCCCTCCGGATCAG 294 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| || || || || ||||||||||| | | | |||| ||||| || Sbjct 293 CAGAGATTGATTTTCGCGGGCAAGCAGCTGGAGGACGGACGCACCTTGTCCGATTACAAT 234 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| || || || || || |||||| | |||||||| Sbjct 233 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTGCGACTTCGCGGAGG 187 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| ||| | || || |||| || |||||||| || |||||||| |||||| Sbjct 872 ACCATGCAGATTTTTGTGAAGACATTAACTGGAAAAACTATAACTCTCGAAGTTGAAGCC 813 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | ||||| ||||| || |||||||| || || || || || Sbjct 812 TCTGACACTATCGAGAACGTAAAGGCGAAGATTCAGGACAAAGAGGGTATTCCACCTGAC 753 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||| || |||||||||||||| || || | | | |||| ||||| Sbjct 752 CAGCAGCGCTTGATTTTCGCCGGGAAACAGCTTGAAGACGGACGTACCTTGTCCGATTAC 693 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| |||||||| || || || |||| | |||| || || || Sbjct 692 AATATTCAGAAGGAATCCACTCTCCATCTGGTTCTCAGATTACGTGGCGG 643 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||||||||| || || | ||||| || || | Sbjct 185 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAAGTCGAGGCATCT 126 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || |||||||||||||| || ||||| ||||| Sbjct 125 GATACGATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGCATTCCTCCGGATCAG 66 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| || || || || ||||||||||| | | | |||| ||||| || Sbjct 65 CAGAGATTGATTTTCGCGGGCAAGCAGCTGGAGGACGGACGCACCTTGTCCGATTACAAT 6 Query 24884 ATTCA 24888 ||||| Sbjct 5 ATTCA 1 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| | || || || || || || | || || ||||| | Sbjct 641 ATGCAGATCTTTGTCAAAACCTTGACGGGAAAGACCATCACATTGGAGGTTGAAGCTTCA 582 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || || || || |||||||| || || || ||||| Sbjct 581 GACACGATCGAGAATGTCAAAGCGAAAATTCAGGATAAAGAAGGCATCCCCCCAGATCAG 522 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || |||||||| || || | | | || || || ||| Sbjct 521 CAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGACGGCCGCACGCTTTCCGACTACAAC 462 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || || || || | |||||||| Sbjct 461 ATTCAGAAAGAGTCAACTTTGCACTTGGT 433 >seq121 Length=74473 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | ||||| || || |||||||| ||||| ||||| ||||||||| Sbjct 8313 ACCATGCAGATTTTCGTCAAAACCCTCACTGGTAAAACCATTACTCTCGAGGTAGAAGCC 8254 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | |||| || ||| ||||| || || ||||| ||||| || || ||| Sbjct 8253 TCTGATACCATCGAAAATGTGAAAGCCAAGATTCAGGATAAAGAGGGAATTCCACCAGAT 8194 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || | |||||||| || ||||||||||| ||| | | | || |||||| Sbjct 8193 CAGCAGCGACTTATCTTTGCTGGAAAACAGCTGGAAGATGGACGTACTCTCTCTGATTAT 8134 Query 24881 AACATTCAAAA 24891 ||||| ||||| Sbjct 8133 AACATCCAAAA 8123 >seq12857 Length=4317 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || |||||||| || || || | ||||| || || || Sbjct 4044 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTCGAGGCATCC 3985 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| || || || ||||||||||| || ||||| |||||| Sbjct 3984 GATACAATTGAAAATGTCAAAGCCAAAATTCAGGACAAAGAAGGCATCCCTCCGGATCAA 3925 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || ||||| || || ||| | | | || ||||| || Sbjct 3924 CAGAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACGCTTTCTGATTACAAT 3865 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| || || || || || Sbjct 3864 ATTCAGAAGGAATCTACTCTGCATTTAGT 3836 Score = 102 bits (112), Expect = 7e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || || |||||||| || | || ||||| || | Sbjct 3816 ATGCAAATTTTCGTCAAAACTTTGACAGGAAAAACTATCACTTTGGAGGTAGAGGCTTCG 3757 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| || || ||||||||||| || || ||||| ||||| Sbjct 3756 GATACGATCGAGAATGTAAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 3697 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||| || || || || ||||| ||||| | | ||||||||||||| Sbjct 3696 CAAAGACTGATTTTCGCGGGCAAGCAGCTCGAGGACGGACGTACTTTGTCAGATTATAAT 3637 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| || ||||| |||||||| |||| Sbjct 3636 ATTCAGAAAGAATCTACACTACATCTTG 3609 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||||||||| || || | ||||| || || | Sbjct 4272 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAAGTCGAGGCATCT 4213 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||| | || ||| || || || || || ||||| || ||||| ||||| Sbjct 4212 GATACGATAGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGTATCCCTCCGGATCAG 4153 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || ||||| || || ||| | | | || ||||| || Sbjct 4152 CAGAGATTGATCTTTGCAGGAAAACAACTCGAAGATGGTCGCACGCTTTCTGATTACAAT 4093 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| || |||| || || Sbjct 4092 ATTCAGAAGGAATCAACTTTACATTTAGT 4064 >seq5929 Length=11024 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 139063 ACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG 139122 ||||| | |||||| ||| || || | || ||||| || ||||| | ||| | | Sbjct 668 ACAAACATATTGACAGCAATAGATGCCAGATTACACACAGCAACTTCCCCAGGGCCAGAG 609 Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 |||| | || ||||| |||||||| || || ||||| ||||| | | || ||||| Sbjct 608 TATTGAATAACTTCGGTGCACAAATTGCTGCATTTGATTGTACCAATGTGCTGATGATTA 549 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238 |||||| || || ||| ||||||||||| || || || |||||||| ||||| Sbjct 548 GATTTTCGATTGCAGTGATCCTTGTAAAGCATGTAAGGAGTTCCAGTTTCTACTTG 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449690624609120