Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_021930.1 Length=7267 Score E Sequences producing significant alignments: (Bits) Value seq8046 134 6e-28 >seq8046 Length=7925 Score = 134 bits (148), Expect = 6e-28 Identities = 332/491 (68%), Gaps = 22/491 (4%) Strand=Plus/Plus Query 2301 AGGGGAGGGTGACTGGAAACAAATATTTCAATTTTTAAAGTATCAGAGGGTAAATGTGTT 2360 || ||| || || ||||| | ||| | | ||||||| | ||||| ||||| | | | Sbjct 4041 AGAGGAAGGAGATTGGAAGCCTATAGTAAAGTTTTTAAGGCATCAGGGGGTAGAGTTCGT 4100 Query 2361 GTCTTTTTTAGCTGCTTTTAAAGATTTTTTACAAGGTGTGCCCAAAAGAAATTGCATAGT 2420 ||| || | ||||| ||||| |||||| ||||||||||||| | ||||||||||| Sbjct 4101 GTCATTCCTTGCTGCCTTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGT 4160 Query 2421 AATTTTTGGACCTCCTAATACTGGAAAATCA-ATGTTTGTTATGAGTCTTTTGAAATTTT 2479 ||| ||||||| | |||| || |||||| || | || |||||||||||| | || Sbjct 4161 GTTTTATGGACCTGCAGATACAGGCAAATCATATTTCTG-CATGAGTCTTTTGCAGTTCC 4219 Query 2480 TACAAGGTAAAGTTTTATCTTTTGTTAATAGCAGGAGTCATTTTTGGCTGCAGCCCCTTA 2539 || || || |||| | || ||| ||| || || |||||||||||| |||||| Sbjct 4220 TAGGTGGCGCTGTAATATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAG-CCCTTA 4278 Query 2540 GCTTTGCA--AAATTTGCAGTTTTAGATGATGCCACCTCCCAAACCTGGTTGTATTTTGA 2597 || | || || | | | | | || ||||| || |||| |||| |||| |||| Sbjct 4279 GC-TGACAGTAAGATAGGACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGA 4337 Query 2598 TCAGTATTTAAGAAATGGGCTAGATGGCAATCCAATATCTTTGGATTGCAAGCACAGAGC 2657 | ||| | || || |||||||| || || | | | || | || || | || Sbjct 4338 TACATATCTTAGGAACCTACTAGATGGAAACCCCTTCAGTATAGACAGGAAACATA-AGA 4396 Query 2658 CCCCACT-CAAATTACATTTCCTCCTTTAATGATTACTACAAATATAGAT--GTAAAAGG 2714 ||| || || || | || |||||| |||||||| || || || ||| || | ||| Sbjct 4397 CCCTGCTGCAGATAAAATGTCCTCCATTAATGATAACAACCAACATAAATCCTCTAGAGG 4456 Query 2715 AGACCCTACATATTTA--TATCTGCATAGCAGAATAGTAACA---TTTCAGTTTCCTAAC 2769 || ||| || | ||| ||| |||| | ||||||| ||| ||||| | ||| Sbjct 4457 AG----GACAGATGGAAGTATTTGC---GCAGCAGAGTAACACTGTTTAAGTTTACCAAC 4509 Query 2770 ACATTTCCCTT 2780 |||||||||| Sbjct 4510 CCATTTCCCTT 4520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23129619329936