Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq11802 105 1e-16 seq7007 93.3 7e-13 >seq11802 Length=4877 Score = 105 bits (116), Expect = 1e-16 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||| || ||| |||||| || || ||| Sbjct 2840 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACAGCATGCTTGGCCAACTCTCCAGGCA 2781 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||| || || || |||||||| || || ||| || ||||||||| | Sbjct 2780 AAAGCAGGCGAACAGCCGTTTGGATCTCCCGACTGGTGATGGTCGAGCGCTTGTTGTAGT 2721 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || || |||| | || || |||| || || || ||||| ||||| Sbjct 2720 GAGCTAGACGAGACGCTTCGGCAGCAATTCGCTCGAAAATATCATTTACAAAGCTGTTCA 2661 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||||| || || || || ||| || || ||||||||||| ||||||| Sbjct 2660 TTATGCTCATCGCCTTCGACGAAATTCCGGTGTCAGGATGGACCTGCTTGAGAACCTTGT 2601 Query 1485710 AAA 1485712 ||| Sbjct 2600 AAA 2598 >seq7007 Length=9296 Score = 93.3 bits (102), Expect = 7e-13 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || || |||||| |||||| ||| || | | Sbjct 2480 TGTACTTGGTGACGGCCTTGGTGCCTTCACTCACAGCGTGCTTGGCCAATTCTCCAGGAA 2421 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| ||||| || || || || | | ||||| ||| || || Sbjct 2420 GCAAAAGTCTCACAGCGGTTTGAATTTCCCGAGAGGTAATCGTCGAGCGTTTATTGTAAT 2361 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| ||||||| | | || || |||| | |||||||| || ||||| Sbjct 2360 GCGCCAAACGGGACGCCTCGGCGGCAATACGCTCGAAGACATCGTTGACGAAACTGTTCA 2301 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||| || ||| || || || ||||| || || || | Sbjct 2300 TGATGCTCATGGCTTTACTGGAGATTCCAGTGTCCGGATGTACTTGCTTCAGTACTTTAT 2241 Query 1485710 A 1485710 | Sbjct 2240 A 2240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912331390656956