Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq13874 132 1e-26 >seq13874 Length=3820 Score = 132 bits (146), Expect = 1e-26 Identities = 292/431 (68%), Gaps = 10/431 (2%) Strand=Plus/Plus Query 18653 GAACCATGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGA 18712 ||||||||||| || | ||| || ||||| ||||||||||| || | ||| || Sbjct 2863 GAACCATGCCGGCGGATCGGGTTGTAGAACATCTCGATGTAATCGAACACATCGGATCGG 2922 Query 18713 GCTTCTTCTCGCGTTCCG--TAGATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGA 18770 || | ||| || | || |||||| || ||||| | ||||| || Sbjct 2923 GC--CGGCTCCCGATTCGGATAGATCCGCCGTTTGATCCGCGCTTTCTTCAGGGCACTGA 2980 Query 18771 AAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCGACGGCTCATACTGCCCTCCA 18830 | || ||||| || || || ||||| || ||||| |||||||||||||| || ||| Sbjct 2981 AGAAGCTTTCGGCCACCGCATTGTCGTGGCAGTTGCCGCGACGGCTCATGCTCGGAACCA 3040 Query 18831 GCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCTTGTGTACTGACTGCCTTGATCAG 18890 || | ||||| |||| |||| || | ||| ||| | |||||||| ||||| | Sbjct 3041 TGTGATGGGCCTTCAGAAACGCGCGCCAGTCCTCGCTGGTGAATTGACTGCCCTGATCGG 3100 Query 18891 AATGAACCAGCACCTGCTTTTG--AGGATTACGTCGCCACACGGCCATCAGAAGTGCATT 18948 | || |||| ||| || | ||| || || |||||| || ||| ||||| | Sbjct 3101 AGTGGACCATCAC--GCCAGAGCCAGGTTTGCGCTTCCACACCGCTGCCAGCAGTGCCTG 3158 Query 18949 CAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACC-AGCCAATAACTTTGCGCGAGA 19007 || || | ||| |||||| ||| ||| || || |||||| | | || ||| Sbjct 3159 CAATACCAAATCACGGGTCATCGTGGG-TGCGGTGGCCCAGCCAACGATCTGTCGTGAGT 3217 Query 19008 ACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGAGTCCGGATGTAGGTGATGT 19067 ||||||| | ||| | |||||| ||| |||||| |||| ||| || ||||||||||| | Sbjct 3218 ACAGGTCCATCACCGCCGCCAGAAACAACCAGCCCTCGTAAGTGCGAATGTAGGTGATAT 3277 Query 19068 CCGTTACCCAA 19078 |||| |||||| Sbjct 3278 CCGTCACCCAA 3288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127048449514560