Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_022972.2 Length=37372 Score E Sequences producing significant alignments: (Bits) Value seq680 89.7 1e-13 >seq680 Length=42727 Score = 89.7 bits (98), Expect = 1e-13 Identities = 124/169 (73%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 11818 GTTCGCTGATGGCGGGTACACGGGCGACGGCGGCAAGTACGAGCCTGCGGGTATCGTGCA 11877 ||||| || |||||||| || || |||||||||||||| || || || || | || || Sbjct 3625 GTTCGATGTAGGCGGGTATACCGGTGACGGCGGCAAGTATGAACCGGCCGGGGTGGTACA 3684 Query 11878 CGCCGGCGAGTTCGTGTTCACGAAGGAGCAGACGAGGCGGGC--CGGCGTCGGGAACCTG 11935 | ||||| ||||| | ||||||| |||| ||| || |||||||| |||||| Sbjct 3685 CCGTGGCGAATTCGTTATGCCGAAGGA--AGACACCGCGCGCATCGGCGTCGCTAACCTG 3742 Query 11936 TACGCGATGGCCCGC-GCACTGGCCGGGTACGCGAAGGGTGGCCTTGTG 11983 ||||||||| ||| || | ||||||||| | || ||||||||| Sbjct 3743 TACGCGATGATGCGCAACAAACG-CGGGTACGCCGACGGCGGCCTTGTG 3790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119416586459632