Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq20287 87.8 2e-12 >seq20287 Length=1926 Score = 87.8 bits (96), Expect = 2e-12 Identities = 201/295 (68%), Gaps = 7/295 (2%) Strand=Plus/Plus Query 115163 GCGATCGCATTGATAGTCAGGTCCCGGCGGGCCAAGTCCTCTTCGATGGTCACATCTG-G 115221 |||||||||||||| || ||||| ||||| |||| || | ||| | || || || | | Sbjct 264 GCGATCGCATTGATGGTGAGGTCGCGGCGAGCCAGATCTTGTTCCAACGTTACGTCGGCG 323 Query 115222 GCTGAACATAACTTCGAAATCGTGGTATCCGTCCCCGGTAGAGCGCTCTTTACGTGCCAG 115281 || | | | ||| | ||| | || || ||| ||| | |||||| | || ||||| Sbjct 324 GCAGCATA-AACCTGGAACCCATGATAGCCGCGACCGCTTTTGCGCTCGGTGCGGGCCAG 382 Query 115282 TGCATACTCTTCCTTTGTCTCTGGGTGCAGGTACACCGGGAAGGCAGCGCCGTGCGGCAT 115341 |||||| || || ||||| ||||||||| |||| || || | ||| | | || Sbjct 383 TGCATATTCCTCGCCCGTCTCCGGGTGCAGGAACACTGGAAAATCCTTGCC-TACCGC-- 439 Query 115342 ACCGAACCCCAGAGACAGCATTTCTTCATGGGTTG-AGCCAACAACCACGTAATCACGGT 115400 | || |||| ||||||||| || |||| | ||| || || || || || |||| Sbjct 440 GCGAAAGCCCAAGCCCAGCATTTCCTC-GGGGTCGCTGCCCACCACGACATAGTCGCGGT 498 Query 115401 CCTTGCTCGGAACACCCATCAGTTCATCGCGGACTGCTCCGCCGACCAAATAAAT 115455 | | ||| |||| ||| ||||||| || || ||||||| || |||||| Sbjct 499 CAGTTACCGGCCGCCCCAGCAGCGCATCGCGCACCGCGCCGCCGATCAGATAAAT 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485805202450560