Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq8827 253 7e-62 seq838 127 7e-24 seq2215 125 2e-23 seq15649 86.0 2e-11 seq15648 86.0 2e-11 >seq8827 Length=7080 Score = 253 bits (280), Expect = 7e-62 Identities = 365/508 (72%), Gaps = 5/508 (1%) Strand=Plus/Minus Query 69559 AATGCAGGCGCAGATGCTACAAAAGTTGGTATTGGCCCAGGTAAAGTATGTATTACTAAA 69618 |||| ||| || |||||| |||||||||| |||| || ||||||||||||||||||||| Sbjct 4931 AATG-AGGAGCTGATGCTTTAAAAGTTGGTGTTGGACCTGGTAAAGTATGTATTACTAAA 4873 Query 69619 ATCAAAACTGGTTTTGGTACTGGCGGCTGGCAGTTAGCTGCATTGCGTTGGTGTTCA-AA 69677 | ||||||||||||||||| || || || || ||| ||| || | | | | || Sbjct 4872 TTGAAAACTGGTTTTGGTACAGGTGGATGACAATTAAATGCTTTAAAA-GATTTAAATAA 4814 Query 69678 AGTAGCTACTAAACCAATAATTGCTGATGGTGGTATTCGTACTAACGGTGATATTGCTAA 69737 ||| |||| ||||| ||||||||||||||||||| ||| ||| |||||||||||||| Sbjct 4813 AGTTGCTAAAAAACCTTTAATTGCTGATGGTGGTATACGTTGTAATGGTGATATTGCTAA 4754 Query 69738 ATCTGTACGTTTTGGCGCTTCAATGGTTATGATTGGTTCGCTATTTGCGGGTCACGAGGA 69797 | | || ||||| || ||||| ||||| ||| | || || ||||| || || Sbjct 4753 GGCAATTCGCTTTGGAGCAACAATGATTATGGCAGGTAGTATTTTAGCTGGTCATGATGA 4694 Query 69798 ATCACCAGGTGAGACGATAGaaaaaaaTGGTAAATTATATAAAGAGTATTTTGGATCCGC 69857 ||| |||||| | || || |||||||| ||||||||| |||| ||| || || Sbjct 4693 ATCTCCAGGTAACTTAGTAACTAATAATGGTAAGAAATATAAAGAATATTATGGTTCAGC 4634 Query 69858 TTCTGAATATCAAAAGGGTGAAAAGAAGAACGTTGAAGGAAAGAAGATACATGTAGAATG 69917 | || | | | || | |||| || || ||||||| ||||| || || | Sbjct 4633 TAGTGTCTTTAATAAAGTAGAAACAAAAAATATTGAAGGTAAGAAAATTTTAGTTTCTTA 4574 Query 69918 TAAAGGGAGTTTGAAAGATACGTTGATTGAAATGGAACAAGATCTTCAATCTTCAATTTC 69977 |||||| | ||||| | | ||||| ||| |||| | ||||| ||||||| Sbjct 4573 TAAAGGTCCAATTGCTGATACTTATAAAGAAATAGAAGAAGACTTACAATCAGCAATTTC 4514 Query 69978 TTATGCTGGTGGTAAAGATTTATTAGCAAT-TAGAAATGTAGATTATGTCGTTGTTAAGA 70036 ||||||||| |||||||||||| |||||| |||||||| |||||||| |||||||| Sbjct 4513 TTATGCTGGAGGTAAAGATTTAGAAGCAATAAAGAAATGT-GATTATGTTCTTGTTAAGG 4455 Query 70037 ACTCCATTTTCAATGGAGATAAAAGTTA 70064 ||||| ||||| ||| | || || Sbjct 4454 GAACCATTAATAATGGTGATGATAGATA 4427 >seq838 Length=39025 Score = 127 bits (140), Expect = 7e-24 Identities = 382/578 (66%), Gaps = 29/578 (5%) Strand=Plus/Plus Query 182240 GAGCTTTACCTGATGCAAGAGACGGATTAAAACCATCACAACGTCGAATTTTATATGCTT 182299 |||| ||||| ||||||||||| || ||||||||| || ||||| ||||||||| | Sbjct 26798 GAGCCTTACCAGATGCAAGAGATGGTTTAAAACCAGTTCACCGTCGTATTTTATATAGTA 26857 Query 182300 TATGGGATTTAGGAATGCTACCTCAT---AAACCATATCGAAAATCAGCAACAGTGAATG 182356 | | ||||||||| || ||||| ||||| ||| |||||||| | | || Sbjct 26858 TGTTTAATTTAGGAA---TAACTCATGACAAACCTTATAAGAAATCAGCTCGAATTGTTG 26914 Query 182357 GCCACGTAATGGGTAATTTCCATCCACATGGTGATAC------TTATGGTGTAATGGTAA 182410 | | ||||| || || | || || ||||||||||| ||||| |||||||| Sbjct 26915 GTGAAGTAATTGGGAAGTATCACCCTCATGGTGATACAGCAGTTTATGAATCAATGGTAA 26974 Query 182411 ATATGACAAATGAATTAAGTATTCGATATCCAGTAGTTGATGGTCAGGGTAACTTTGGTA 182470 ||| | | || | ||| ||||| |||||||||| || || || |||||| Sbjct 26975 GAATGGCTCAGACTTTTTCTTATCGTTATCCTTTAGTTGATGGCCATGGAAATTTTGGT- 27033 Query 182471 ACCCATTAGATGGTGATGGTGCAGCAGCGATGCGTTATACTGAAGCACG-TTTAGATAAT 182529 || | ||||||||| || | || || ||||||||||||||| || | |||| ||| Sbjct 27034 --TCAATTGATGGTGATAGTCCTGCTGCTATGCGTTATACTGAATCAAGAATTAG-TAAA 27090 Query 182530 CTTGGAATGTTAAT--GCTACAAGATGTTGACAAAAAAGTTGTTGACTTCCAACCTAACT 182587 ||| | || | | | || ||||| | || || || ||| |||| |||| | Sbjct 27091 ATTGCCA-GTGAGTTAGTTA-AAGATTTAGATAAGGAAACAGTTAACTTTGTTTCTAATT 27148 Query 182588 ---ATTCTGAAGAAACAGAAGAACCAGTGATTTTACCAGCAGGGATTCCATACTTACTTA 182644 || || ||||| |||||||||| || ||||| || |||| | ||| | Sbjct 27149 TTGATGCTACAGAAA---AAGAACCAGTAGTTCTACCATCATATTTTCCTAATTTATTAG 27205 Query 182645 TAAATGGAGCAACTGGTATTGCAACTGGTTATACTACTGACATACCTTCCCATAATTTAA 182704 ||||| | ||| ||||| || | | || || || | |||||||||| Sbjct 27206 CTAATGGTACTCTTGGAATTGCTGTTGCTATGGCAACAAGTATTCCACCTCATAATTTAA 27265 Query 182705 GCGAAGTAATTGATGGTATCTTAAATTTAATTCAAAATCCTGAAATTGATATTCATGGGT 182764 ||||| ||||||| ||| | || | ||| |||| ||| |||| || ||| | Sbjct 27266 ATGAAGTTATTGATGCTATTATTTATGTTGCTCATAATCGTGATTGTGATGTT-TTGGAT 27324 Query 182765 TAATGAAACA-CATTAAAGGTCCTGATTTACCTACTGG 182801 | || ||| | ||| ||||| || ||||| || || || Sbjct 27325 TTATTAAATATCATCAAAGGACCAGATTTTCCAACAGG 27362 >seq2215 Length=24088 Score = 125 bits (138), Expect = 2e-23 Identities = 378/571 (66%), Gaps = 49/571 (9%) Strand=Plus/Minus Query 69096 ATTTGATTATGAAGATATTCAATTGGTACC-AGCAAAGTGTATAGTTGAGAGCCGTTCCG 69154 |||||||| |||||||||| | || | | ||||| | | || |||||| | | Sbjct 551 ATTTGATTTTGAAGATATTAATTTAATTGCTAGCAAGG-GCATTGTTGAGTCGAGAAACC 493 Query 69155 AGTGTGATACATCTATTAGTTTAGGGAATCGA---AAATTTAAATTACCAGTAGTTCCAT 69211 | |||||||| |||| ||| ||| | || |||||| | ||||| |||||| Sbjct 492 AATGTGATACTAGTATTGAATTA---AATGGTTTTAAGTTTAAAATTCCAGTTGTTCCAG 436 Query 69212 CTAATATGCAAACGATTATTGATGAGAAAATAGCTGCTTATTTAGCNNNNNNNGGCTATT 69271 | |||||| | || ||||||||||| || | || ||||| | |||| Sbjct 435 CAAATATGAGTGCAGTTGTTGATGAGAAATTATGTTTTTGATTAGCAAAAAATGATTATT 376 Query 69272 TCTATGTAATGCATAGATTTGAACCCGAGACTAGACTTGATTTTATTAAAGATATGCAAA 69331 | ||| | |||||| | ||| | || | | ||| |||| ||| | || ||| Sbjct 375 TTTATATTATGCATCGTTTTAATATTGA---TCAAATTGTTTTTGTTAGGCAGTTGAAAA 319 Query 69332 CTCGCAACTTATATGCTTCTATTAGTGTTGGTGTAAAAGAAGAAGAGTATCAATTTATTA 69391 || ||||||| ||||||||| ||||| || || ||||| | || || | ||| Sbjct 318 AAGCTAAATTATATGTTTCTATTAGCGTTGGAGTTAAGCAAGAACA-TAAAGATCTTTTA 260 Query 69392 ATCAATTAGCTGATGAAAAAC-TTG-------TTCCAGAATATATCACTATTGATATAGC 69443 | || || |||| | ||| ||||||| | ||| || |||||||| || Sbjct 259 AAAAA-------ATTAAAATCATTGGATTTAATTCCAGATTTTATTACGATTGATATTGC 207 Query 69444 TCACGGACATTCTAATGCTGTTATTA-AAATGATTCAACATAT-AAAGAAGATGTTA--- 69498 ||| || ||| || || || | | ||||| | || ||| |||||| | ||| Sbjct 206 TCATGGTCATAGTATTG-TGATGGAAGAAATGCTGAAATTTATTAAAGAAACTTTTAAAG 148 Query 69499 ---CCAAAT---AG--TTTTGTTATTGCTGGTAATGTTG---GTACACCTGAAGCTGTTC 69547 | ||| || |||||||||||| |||||| || || || |||| ||| Sbjct 147 ATACTAAAACTAAGCCTTTTGTTATTGCAGGTAATATTATGAGTGAAC---AAGCAGTTA 91 Query 69548 GTGAACTTGAAA-ATGCAGGCGCAGATGCTACAAAAGTTGGTATTGGCCCAGGTAAAGTA 69606 || | |||| ||| ||| || |||||| |||||||||| |||| || ||||||||| Sbjct 90 AGGATTTAGAAACATG-AGGAGCTGATGCTTTAAAAGTTGGTGTTGGACCTGGTAAAGTA 32 Query 69607 TGTATTACTAAAATCAAAACTGGTTTTGGTA 69637 |||||||||||| | |||||||||||||||| Sbjct 31 TGTATTACTAAATTGAAAACTGGTTTTGGTA 1 >seq15649 Length=3153 Score = 86.0 bits (94), Expect = 2e-11 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 58667 CGTGGTGTAGCGGTTA-ACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCGG 58725 ||| ||| || |||| ||||||| |||||||||| ||||||||| ||||||||||| | Sbjct 630 CGTAGTGGAGTGGTTTTACACGCCCGCCTGTCACGCGGGAGATCGCGGGTTCGAATCCCG 571 Query 58726 TCGGGGCCGCCATTAAGTAT-TTAATGGAAAGAGGTGAAAA 58765 ||||| ||||||| || | | ||||| ||| | || |||| Sbjct 570 TCGGGACCGCCATCAATTTTGTTAATTAAAATAAGTAAAAA 530 >seq15648 Length=3153 Score = 86.0 bits (94), Expect = 2e-11 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 58667 CGTGGTGTAGCGGTTA-ACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCGG 58725 ||| ||| || |||| ||||||| |||||||||| ||||||||| ||||||||||| | Sbjct 2524 CGTAGTGGAGTGGTTTTACACGCCCGCCTGTCACGCGGGAGATCGCGGGTTCGAATCCCG 2583 Query 58726 TCGGGGCCGCCATTAAGTAT-TTAATGGAAAGAGGTGAAAA 58765 ||||| ||||||| || | | ||||| ||| | || |||| Sbjct 2584 TCGGGACCGCCATCAATTTTGTTAATTAAAATAAGTAAAAA 2624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591159732660992