Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_023891.1 Length=7314 Score E Sequences producing significant alignments: (Bits) Value seq8046 80.6 1e-11 >seq8046 Length=7925 Score = 80.6 bits (88), Expect = 1e-11 Identities = 155/225 (69%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 1950 TTTAAACAATTTTTAAAAGGTACACCTAAAAGTAATTGTTTAGTGTTTTATGGTCCACCA 2009 ||||| ||||||||||||| || || | ||||| ||||||||||||| || || Sbjct 4117 TTTAAGTCATTTTTAAAAGGTGTGCCCAAGAAGAATTGCATAGTGTTTTATGGACCTGCA 4176 Query 2010 GATTCAGGAAAATCATACTT-TACGT-ATTCCTTAACAAAATTTCTAAGAGGTAAAGTTA 2067 ||| |||| |||||||| || | | | | || || | | || ||| | || || | Sbjct 4177 GATACAGGCAAATCATATTTCTGCATGAGTCTTTTGC--AGTTCCTAGGTGGCGCTGTAA 4234 Query 2068 TTTCCTATGTAAATACTAAAAGCCAATTTTTTCTACAACCCTTATCAGATTGTAAAATAG 2127 | || |||| ||| | | ||||| |||| || || |||||| | || |||| |||| Sbjct 4235 TATCATATGCCAATTCCAGTAGCCACTTTTGGCTGCAGCCCTTAGCTGACAGTAAGATAG 4294 Query 2128 GATTATTAGATGATGCAACATATCCTTGTTGGACATTTTTTGATA 2172 || || | || ||||| || | || ||||| | | |||||| Sbjct 4295 GACTACTGGACGATGCGACGGCCCAGTGCTGGACGTATATTGATA 4339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23279957057568