Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1592 118 7e-22 seq2779 102 5e-17 seq12857 95.1 8e-15 seq121 95.1 8e-15 >seq1592 Length=29089 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || | ||| |||||| || |||||||| ||||| Sbjct 414 ACCACCACGTAGACGAAGAACCAAGTGCAAAGTTGACTCTTTCTGAATGTTGTAGTCGGA 473 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | |||||||| ||||| ||||| | ||||||||| | || Sbjct 474 AAGCGTGCGGCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCTGGGGG 533 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || ||||||| ||| | ||| || | ||||| | ||| | Sbjct 534 GATGCCTTCTTTATCCTGAATTTTCGCTTTGA-CATTCTCGATCGTGTCTGAAGCTTCAA 592 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || || ||||| |||||||||||||| Sbjct 593 CCTCCAATGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATCTGCAT 641 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| |||||| || || || || ||||||||||| | || ||| |||| || Sbjct 661 ACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAGGTACGTCCGTCTTCA 720 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||| ||||| |||||||| |||||||| || | || | ||| |||||||| | Sbjct 721 AGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTTTGTCCTGA 780 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| | | || | || | ||||| | ||| || || | || || ||||| Sbjct 781 ATCTTC-GCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTATAGTTTT 839 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || ||||| || || ||||| |||||||| || Sbjct 840 TCCAGTTAATGTCTTCACAAAAATCTGCATGGT 872 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || || ||||| |||||| || ||||| || ||||||||||| | |||||| || Sbjct 199 CGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCG 258 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||| || || || || |||||||| | ||||||||| | || | ||||||||| Sbjct 259 TCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTG 318 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || |||||| | || |||| || | || || | || || || | || || Sbjct 319 TCTTGAATTTT-GGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAAT 377 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||| || || || ||||| || || || |||||| Sbjct 378 AGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCATA 414 Score = 87.8 bits (96), Expect = 1e-12 Identities = 133/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 33565 TGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAA 33624 || || ||||||||||| | |||||| |||| |||| || || || || |||||||| Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 33625 CGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-AC 33683 | ||||||||| | || | ||||||||||| |||||| | || |||| || | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTT-GGCTTTGACATTCTCAAT 119 Query 33684 GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGAT 33743 || || || || || || | ||||| |||||||| || | || || || || || Sbjct 120 CGTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAAT 179 Query 33744 CTGCATA 33750 ||||||| Sbjct 180 CTGCATA 186 >seq2779 Length=20704 Score = 102 bits (112), Expect = 5e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| || || || || ||||||||||| || || | | || || Sbjct 8395 ACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCCATCTTCA 8454 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | |||||| || || ||||||| |||||||||||| | || | || |||||||| Sbjct 8455 AGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCCTGG 8514 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| ||| |||| || | ||| || | ||| || |||| ||||| ||||| Sbjct 8515 ATTTTGGCCTTC-ACATTTTCTATGGTATCTGAAGCTTCAACTTCAAGGGTGATGGTTTT 8573 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| | || ||||||||||||||||| Sbjct 8574 GCCTGTGAGAGTCTTTACAAAGATCTGCAT 8603 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || ||||| || || |||||||| || || | | || |||| || || ||||||||| Sbjct 8185 TCCTTTTGAATATTATAATCGGAAAGAGTTCTGCCATCTTCCAGCTGCTTACCGGCAAAA 8244 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||| |||||||| | || | ||||||||||| ||||| || || || | Sbjct 8245 ATGAGACGTTGCTGATCGGGAGGAATTCCTTCTTTGTCCTGGATTTT-TGCTTTTACGTT 8303 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | |||||| | ||| || |||| || || ||||| ||||| | ||||| || Sbjct 8304 CTCGATGGTGTCTGAAGCTTCGACTTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCAC 8363 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 8364 AAAGATCTGCAT 8375 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| ||| || ||| || || || || ||||||||||| || || | | || ||| Sbjct 8623 ACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCCATCTTCC 8682 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | |||||||||||||| |||| ||||||||||| | || | ||||| ||||| | Sbjct 8683 AGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGTGGAATGCCTTCCTTGTCTTGA 8742 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | || ||||| || | ||||| | ||| || |||| ||||| ||||| Sbjct 8743 ATCTT-GGCTTTAACATTCTCTATAGTGTCAGAAGCTTCTACCTCAAGGGTGATGGTTTT 8801 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| ||||| Sbjct 8802 CCCAGTGAGAGTTTTCACGAAGATTTGCAT 8831 >seq12857 Length=4317 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 || ||||| ||||| || || || || |||||||| || || ||||| | || || Sbjct 3836 ACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTCA 3895 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||||||| ||||||||||| | ||| ||||| | || | ||||||||||| | Sbjct 3896 AGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCTTTGTCCTGA 3955 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| | || |||| || | || ||| || || || || | ||||| || || Sbjct 3956 ATTTT-GGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTGATGGTCTT 4014 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||| || | || || || || ||||||||| Sbjct 4015 ACCGGTGAGAGTCTTGACGAAAATCTGCATA 4045 >seq121 Length=74473 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619 ||||||| ||||| ||||| ||||| || ||| | || |||| |||||||| ||||| | Sbjct 8121 CTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTGTTTTCCAGCAAAGA 8180 Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679 | | |||||||||||| | || | || ||||| || ||| || |||| |||| Sbjct 8181 TAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTGGCTTTC-ACATTT 8239 Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738 || | ||| || | ||| || || | || || |||||||| || | ||||| || Sbjct 8240 TCGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGTGAGGGTTTTGACG 8299 Query 33739 AAGATCTGCATAGT 33752 || |||||||| || Sbjct 8300 AAAATCTGCATGGT 8313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328556560231680