Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq13651 147 9e-31 >seq13651 Length=3921 Score = 147 bits (162), Expect = 9e-31 Identities = 338/503 (67%), Gaps = 11/503 (2%) Strand=Plus/Minus Query 25510 CTGGCGCTGATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAA 25569 ||||| ||||| || || || || || || |||| || || ||||||| ||| || Sbjct 3507 CTGGCCCTGATCGCGGCCGGCGCATCGGCTCCTGTCATGATGTCGCAGTTTCAGGAAGAG 3448 Query 25570 AAAGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGGATCTGGACCATCTGCCGT 25629 ||||||||| | | | || ||||||| || |||| || |||||||| || ||| | Sbjct 3447 AAAGAAGGTCAGCGCCTGACCGCATACCAGGACGGTGTTGGAATCTGGACAATTTGCGGC 3388 Query 25630 GGAGCCACCCGGGTGGATGGT---AAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAA 25686 || | || ||| | || ||| ||||| |||| | ||| | || Sbjct 3387 GGCGTGACGATGGTCAACGGCCAGAAGGTTGTGAAGG--GGCA-GCGCCTGACCGCCGAG 3331 Query 25687 AAATGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAAC 25746 | ||| | | | || |||| || | | | ||||| || | ||||| || ||| Sbjct 3330 CAGTGCAAGCAGATTGACGCAGCAGAGCAGAAAAAGGCTCTCGACTGGGTAGACCGCAAC 3271 Query 25747 ATCAAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAAC 25806 |||| || | ||||| ||||| || |||| ||||| || ||||||||||| | ||| Sbjct 3270 GTCAAGGTAACGCTGACCGAACCTCAAAAAGTTGGTATCGCCTCATTCTGTCCGTGGAAC 3211 Query 25807 ATTGGCCCGGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAA--TTAATGCAGGAGATC 25864 || ||||| || || || ||| | || || ||||| || ||| | || || || || | Sbjct 3210 ATCGGCCCTGGAAAATGCTTCACCTCCACCTTTTACAA--GAAGCTGAACGCCGGCGACC 3153 Query 25865 GAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCGTA 25924 | | ||||||||| || || ||| | ||||| | |||| |||| | || ||||| | Sbjct 3152 GCATTGGTGCCTGCCGAGAAATCCGCCGCTGGATATACGACGCTGGCCGAGATTGCCGCA 3093 Query 25925 TTCGCTCAAATAACTGTTATGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGT 25984 | ||||| |||||||| || || ||| | || || || ||||| || || || | Sbjct 3092 TCCGCTCGAATAACTGCTACGGGCAGATCGTACGGCGCGATCAGGAAGCCGAACTAGCTT 3033 Query 25985 GCTGGGGAATCGACAGAT-AAGC 26006 |||||||| | |||| || |||| Sbjct 3032 GCTGGGGATTGGACAAATGAAGC 3010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200422060593040