Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_026611.1 Length=43129 Score E Sequences producing significant alignments: (Bits) Value seq24957 89.7 1e-13 >seq24957 Length=1239 Score = 89.7 bits (98), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 22265 CGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTACTTTTCAATGGTTTACGCAAT 22324 || ||||| ||||||||| |||||| | |||||| | |||||| |||||| | Sbjct 465 CGTAGGTCATAGGTTCGAATCCTATAGGGCGTGCCATTAAGTATCAATGAGTTACGCCTT 406 Query 22325 TCT---CGTCAATCCGTCATTTCCTCCTTGTGTCGTTTTTGTGTCGCAGTCATCGAAAAG 22381 || |||| ||| ||||| || | | | | |||| | | | | |||||| Sbjct 405 TCATCCCGTCTTTCCA--ATTTCATCATGG-GACAGATTTGGGACTAAACCTCCGAAAAT 349 Query 22382 CAGGTCAATTTTCTTGGCATGCTCAGTGAGATGGTTGGGGGCTAGGTGCGCGTATCTCCT 22441 | ||||||| | | |||||||||||||||||||| || || ||||| | ||||| | Sbjct 348 CGCATCAATTTGCCTCGCATGCTCAGTGAGATGGTTCGGTGCAAGGTGAGTGTATCGCTG 289 Query 22442 GACCATCTCTATGCACTCCCAGCC 22465 ||||| ||||||| ||||||||| Sbjct 288 TACCATTTCTATGCTCTCCCAGCC 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137830934995768