Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1592 161 1e-34 seq2779 140 3e-28 seq12857 127 2e-24 seq121 107 2e-18 >seq1592 Length=29089 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||||| || | || || ||||||||||||||||| ||||| ||| Sbjct 187 CCTCCGCGAAGTCGCAAAACTAAATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGAC 246 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || |||||||| | ||||||||| || || Sbjct 247 AAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGG 306 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| ||||||||||| |||||| || | || || || | || || Sbjct 307 ATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACT 366 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||| ||||| || || || ||||| |||||||||||||| Sbjct 367 TCCAAAGTAATAGTTTTTCCCGTCAAGGTTTTGACGAAAATTTGCAT 413 Score = 122 bits (134), Expect = 9e-23 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134529 TGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAA 134588 ||||| ||||| ||| | |||| | ||| || ||||| ||||| || |||||||| Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 134589 CGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT 134648 | ||||||||| || || ||||||||||| ||||||||||| |||||| || | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATC 120 Query 134649 GTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATT 134708 || || || | || || || | || |||||||||||||| | ||| || |||||||| Sbjct 121 GTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATC 180 Query 134709 TGCAT 134713 ||||| Sbjct 181 TGCAT 185 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||||||||| ||||| ||||| ||| | ||| | ||| || Sbjct 661 ACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAGGTACGTCCGTCTTCA 720 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || || |||||||| |||||||| || || || || || ||||| || ||| Sbjct 721 AGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTTTGTCCTGA 780 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | ||||| || | ||| || |||||||| || ||||| Sbjct 781 ATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTATAGTTTTT 840 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| ||||| Sbjct 841 CCAGTTAATGTCTTCACAAAAATCTGCAT 869 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || || || ||||||||||||||| || ||| | ||| || |||||||| || Sbjct 445 GTTGACTCTTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCCGTCTTCAAGCTGTTTTCCA 504 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| ||||| | |||||||| || || ||||||||||| || |||||||| |||| Sbjct 505 GCAAAGATCAATCTTTGCTGATCTGGGGGGATGCCTTCTTTATCCTGAATTTTCGCTTTG 564 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||||| || | ||| || || | || ||||| || || || || ||| Sbjct 565 ACATTCTCGATCGTGTCTGAAGCTTCAACCTCCAATGTGATGGTCTTTCCCGTCAAGGTT 624 Query 134697 TTAACGAAAATTTGCATT 134714 || || || || |||||| Sbjct 625 TTGACAAAGATCTGCATT 642 >seq2779 Length=20704 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||||| || | ||| || || |||||||||||||| || || ||| | Sbjct 8149 CCTCCGCGAAGTCGCAAAACTAAGTGAAGTGTAGATTCCTTTTGAATATTATAATCGGAA 8208 Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || || | || || ||||| || || |||||||| | ||| ||||||||||| || Sbjct 8209 AGAGTTCTGCCA-TCTTCCAGCTGCTTACCGGCAAAAATGAGACGTTGCTGATCGGGAGG 8267 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| || || |||||| ||| || || | ||||| || | ||| || Sbjct 8268 AATTCCTTCTTTGTCCTGGATTTTTGCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGAC 8327 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || |||||||||||||| || || | |||||| || || || |||||| Sbjct 8328 TTCAAGAGTAATGGTTTTGCCTGTAAGAGTTTTCACAAAGATCTGCATT 8376 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || |||| || || || || ||||||||||| || || ||||| ||| Sbjct 8603 TTCCTCCACGAAGACGCAGGACCAGATGAAGTGTGGATTCCTTCTGGATATTGTAATCGG 8662 Query 134545 CAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || | || || |||||||| || ||||| |||| ||||||||||| || Sbjct 8663 AAAGAGTTCTGCCA-TCTTCCAGCTGTTTTCCGGCAAAGATCAGGCGCTGCTGATCAGGT 8721 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || |||||||| || |||||||| || ||| || || | ||||| || | ||| Sbjct 8722 GGAATGCCTTCCTTGTCTTGAATCTTGGCTTTAACATTCTCTATAGTGTCAGAAGCTTCT 8781 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || || | |||||| ||||| |||||||| Sbjct 8782 ACCTCAAGGGTGATGGTTTTCCCAGTGAGAGTTTTCACGAAGATTTGCAT 8831 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || |||| || || || |||||||||||||| || || ||||| ||| Sbjct 8375 TTCCTCCACGAAGACGCAGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGG 8434 Query 134545 CAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || | || || || |||||||| || ||||||| |||||||||||| || Sbjct 8435 AAAGAGTTCTGCCA-TCTTCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGG 8493 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || ||||| || || || | || || || | ||| Sbjct 8494 GGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCA 8553 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || |||||||| || || | ||| || || || || |||||| Sbjct 8554 ACTTCAAGGGTGATGGTTTTGCCTGTGAGAGTCTTTACAAAGATCTGCATT 8604 >seq12857 Length=4317 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || |||||||| ||||| ||||| || || ||| || || || || ||| Sbjct 3842 TGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTCAAGTTGT 3901 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||||||||| | ||| ||||| || || ||||||||||| || |||||||| Sbjct 3902 TTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCTTTGTCCTGAATTTTG 3961 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | ||| ||||| | || || || | || ||||| |||||||| Sbjct 3962 GCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTGATGGTCTTACCGGTG 4021 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || |||||||| ||||| Sbjct 4022 AGAGTCTTGACGAAAATCTGCAT 4044 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || |||||||| ||||| ||||| || || ||| || || ||||| ||| Sbjct 4070 TGTAAAGTTGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCTTCGAGTTGT 4129 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || |||||||| ||||| | ||||||||| || || || ||||| || || |||||||| Sbjct 4130 TTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGGATACCTTCCTTATCCTGAATTTTG 4189 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | || || || | || || || | || |||||||||||||| Sbjct 4190 GCTTTGACATTCTCTATCGTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTG 4249 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || |||||||| ||||| Sbjct 4250 AGAGTCTTGACGAAAATCTGCAT 4272 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||| ||||| || || | || || ||||| || ||||| || ||||| || || || Sbjct 3587 TTTCCGCCTCTAAGACGGAGTACAAGATGTAGTGTAGATTCTTTCTGAATATTATAATCT 3646 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | ||| | | | ||| |||||||| ||||| || ||||||| | |||||||| || Sbjct 3647 GACAAAG-TACGTCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGG 3705 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || ||||| ||||| ||||||||||| || || || | || || || | || Sbjct 3706 AGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTTACATTCTCGATCGTATCCGAAGCCTC 3765 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || ||||| || || |||||||| |||||||||||||| Sbjct 3766 TACCTCCAAAGTGATAGTTTTTCCTGTCAAAGTTTTGACGAAAATTTGCAT 3816 >seq121 Length=74473 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || |||||||| || ||||| || | ||||||||||| || || || || ||||| Sbjct 8156 TCTTCCAGCTGTTTTCCAGCAAAGATAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTA 8215 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || ||||| || ||| || || | || || || | ||| || |||||||||||| Sbjct 8216 TCCTGAATCTTGGCTTTCACATTTTCGATGGTATCAGAGGCTTCTACCTCGAGAGTAATG 8275 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTT 134722 |||||||| || | ||||| |||||||| ||||| || |||| Sbjct 8276 GTTTTACCAGTGAGGGTTTTGACGAAAATCTGCATGGTGGTTTT 8319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505165891466080