Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq7375 86.0 8e-12 seq6906 82.4 9e-11 >seq7375 Length=8785 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 18757 GGTTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGTGGGTTCAAGTC 18816 || |||||||||| ||||||||||||| ||||||||||| ||| |||| |||||| |||| Sbjct 833 GGGTGTAGCTCAGCTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTC 774 Query 18817 CCATCAATCCCG 18828 || ||| || || Sbjct 773 CCGTCACTCGCG 762 >seq6906 Length=9444 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/88 (82%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 17851 TGCGAGTGTGGCGGAATCGGTAGACGCACCAGACTTAAAATCTGTTGAG--CATTATGCT 17908 |||||| ||||||||||||||||||||| |||||||||||| ||||| | || | Sbjct 9067 TGCGAGCTTGGCGGAATCGGTAGACGCACAAGACTTAAAATC--TTGAGTTCCATAGGGA 9010 Query 17909 CGTGGGAGTTCAAGTCTCCCTACTCGCA 17936 |||||| ||||||||| ||| |||||| Sbjct 9009 CGTGGGGGTTCAAGTCCCCCAGCTCGCA 8982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605730805283520