Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq36678 102 2e-17 >seq36678 Length=505 Score = 102 bits (112), Expect = 2e-17 Identities = 125/168 (74%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 28523 ATGATGCTTGCTGTTCTGGAATACGGAATCGAAGACGATGAAATGGCTGAATTGACTAAG 28582 ||| | || || |||||||| | || || |||||||| |||||||| || ||| ||||| Sbjct 354 ATGTTACTGGCCGTTCTGGAGTGGGGTATGGAAGACGAAGAAATGGCGGAGTTGGCTAAG 295 Query 28583 CGGCTTGCCGATTACCTGACA---AAAGAAAAAGCCCCGAAGAACGGCGAATTCTTCGAG 28639 || || || | || ||| || |||||||| |||||| ||| | | | |||||| Sbjct 294 CGCCTGGCTGGATATCTGTCACCAAAAGAAAACGCCCCG--GAA-GTTGCAGCTTTCGAG 238 Query 28640 GCCTAATGTAGAAAGACTGGATCAATCCACGGGAGTAATTATGACAAA 28687 || | || ||| ||||||||||| ||| |||||||||||| |||| Sbjct 237 GCGTGATTGCGAATTACTGGATCAATTCACAGGAGTAATTATGGCAAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123798670443392