Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq532 93.3 3e-14 >seq532 Length=46805 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888 |||| | | ||||| ||| || |||||||| |||||||| ||| || || || ||| Sbjct 27742 GAAAGATACTTTATCTCTCATGTCTTGGCGTTCTTTGCTGCTTCCGATGGAATCGTTAAT 27801 Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948 || ||| || || | || ||||| || || | | |||||||| ||||| || Sbjct 27802 GAGAATCTGATTGAGAGATTCAGTCAAGAGGTGAAAATCGCGGAAGCACGTTGTTTCTAC 27861 Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 || || || || |||||||||||||||||||| || ||||| Sbjct 27862 GGCTTCCAGATCGCCATAGAAAATATTCATTCTGAGATGTA 27902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397277721608020