Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3434 82.4 8e-11 >seq3434 Length=17783 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 53827 GTCGACTCGATGGGGAACGATGCGGCGATCGTCCAGGCCGCCCGCGTTTCTTACGGGGCC 53886 || |||| ||||| | ||||||||||| || ||||| || || ||||| || ||| | Sbjct 8677 GTTGACTATATGGGAGATGATGCGGCGATTGTGCAGGCTGCACGTGTTTCCTATGGGCGC 8736 Query 53887 GGAACCAAGTCGGTCAGCGACGATCGGGCTCTGATCCGCTATCTCATGCGCCACAAGCAC 53946 || || ||| | | ||| | ||| ||||||||| | ||||||||| || Sbjct 8737 GGCACAAAGAAAAGCCTTCAAGATAAAGGTCTCATCCGCTATTTGATGCGCCACCGTCAT 8796 Query 53947 ACGACGCCGTTTGAGATGGTCGAATTCAAGTTTCACGTGCGCGCGCCCATCTACGTGGCG 54006 ||||| || || || ||| ||| | || |||||||| ||| || | || ||| Sbjct 8797 ACGACCCCTTTCGAAATGTGTGAAATTAAATTTCACGTCAAAATGCCGATTTTTGTTGCG 8856 Query 54007 CGTCAGTGGCTCCGTCACCG 54026 ||||||||||| || || || Sbjct 8857 CGTCAGTGGCTTCGGCATCG 8876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548272451165760