Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2923 84.2 2e-11 >seq2923 Length=20019 Score = 84.2 bits (92), Expect = 2e-11 Identities = 181/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| || |||| | || || || ||||| || || || |||| || || || || Sbjct 7746 CGTGAAAATATATCTCGGACTCGCGGCGTCCTTTCCTCCGGCGAGCCTTGTACCGAATTG 7805 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 ||| |||| || || || | |||||| || |||||||| ||||| | ||| | Sbjct 7806 ACCAATAGGCTGTAGAAGATTAATATTGTTGCTACCGACGAAATTTTGAGCAAGATTAAT 7865 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || || || ||| || || ||||| || || |||| ||||| |||| | || Sbjct 7866 TATAGTCGCCATCAGGGACGTCTCGCCGTGATGGTAAGCCGAGTGCTCGGCGACCGAGCC 7925 Query 152208 CGCCAACTGCGCCACCTTCATGTC-CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266 ||| || ||||||||||| | || ||| | ||| ||| | ||||| | | |||| Sbjct 7926 CGCTAATTGCGCCACCTTTACTTCGCGT-TTATCGTTACGCTTTAAACAGGTGAACATCA 7984 Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTC 152294 | || | |||| ||| || || ||||| Sbjct 7985 CTTTCCTCTGGCCTGGCTTAAAGCCGTC 8012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546964253279200