Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2779 192 7e-44 seq12857 149 7e-31 seq1592 140 4e-28 seq121 136 5e-27 seq3434 89.7 6e-13 seq2923 86.0 7e-12 >seq2779 Length=20704 Score = 192 bits (212), Expect = 7e-44 Identities = 180/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| ||||| || || ||||| || || || ||||| ||||| | Sbjct 8604 AATGCAGATCTTTGTAAAGACTCTCACAGGCAAAACCATCACCCTTGAAGTTGAAGCTTC 8545 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | |||| ||||||| ||||| |||||||| ||||||||||| || || || Sbjct 8544 AGATACCATAGAAAATGTGAAGGCCAAAATCCAGGACAAAGAGGGAATTCCCCCGGATCA 8485 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| ||||| ||||| || ||||| || |||| | || || | || || || Sbjct 8484 GCAGCGTCTGATTTTCGCTGGCAAACAACTTGAAGATGGCAGAACTCTTTCCGATTACAA 8425 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||||||||| |||||||| ||| |||||||||| || ||| Sbjct 8424 TATCCAGAAGGAATCCACGCTTCATCTGGTCCTGCGTCTTCGTGGAGGA 8376 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| || || ||||| ||||| || ||||||||||| || || | Sbjct 8376 AATGCAGATCTTTGTGAAAACTCTTACAGGCAAAACCATTACTCTTGAAGTCGAAGCTTC 8317 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | || || ||||| |||||||| || ||||||||||| || || Sbjct 8316 AGACACCATCGAGAACGTAAAAGCAAAAATCCAGGACAAAGAAGGAATTCCTCCCGATCA 8257 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| |||||||| |||||||| || || |||| | || || | || ||||| Sbjct 8256 GCAACGTCTCATTTTTGCCGGTAAGCAGCTGGAAGATGGCAGAACTCTTTCCGATTATAA 8197 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||||||||||| || ||||| |||| ||||| |||||||| || Sbjct 8196 TATTCAAAAGGAATCTACACTTCACTTAGTTTTGCGACTTCGCGGAGG 8149 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| || || || || || || || || || || |||||||| || | Sbjct 8834 ATCATGCAAATCTTCGTGAAAACTCTCACTGGGAAAACCATCACCCTTGAGGTAGAAGCT 8775 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | || | ||| | || || || ||||| |||||||| || ||||| || || Sbjct 8774 TCTGACACTATAGAGAATGTTAAAGCCAAGATTCAAGACAAGGAAGGCATTCCACCTGAT 8715 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || || ||||| || || || || || |||| | || || | || || Sbjct 8714 CAGCAGCGCCTGATCTTTGCCGGAAAACAGCTGGAAGATGGCAGAACTCTTTCCGATTAC 8655 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||| |||| ||||||||||| |||||||| ||| |||||||||| || ||| Sbjct 8654 AATATCCAGAAGGAATCCACACTTCATCTGGTCCTGCGTCTTCGTGGAGGA 8604 >seq12857 Length=4317 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| || || | || || ||| || Sbjct 4044 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACCATCACATTGGAAGTCGAGGCATCC 3985 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || |||||||||||||| || || || ||||| || || Sbjct 3984 GATACAATTGAAAATGTCAAAGCCAAAATTCAGGACAAAGAAGGCATCCCTCCGGATCAA 3925 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||||||||| || ||||| || |||| ||| || || | || || ||| Sbjct 3924 CAGAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGTCGCACGCTTTCTGATTACAAT 3865 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||| ||| |||| || | ||||| ||||| Sbjct 3864 ATTCAGAAGGAATCTACTCTGCATTTAGTTCTGAGGCTTCGTGGTGG 3818 Score = 145 bits (160), Expect = 9e-30 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | || || || ||||| ||| | ||||| ||| | Sbjct 3816 ATGCAAATTTTCGTCAAAACTTTGACAGGAAAAACTATCACTTTGGAGGTAGAGGCTTCG 3757 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | |||||||||||||| ||||| ||||| |||||||| || ||| Sbjct 3756 GATACGATCGAGAATGTAAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCTGATCAG 3697 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || ||||| || || ||||| |||||||| | ||||| | |||| |||||| Sbjct 3696 CAAAGACTGATTTTCGCGGGCAAGCAGCTCGAGGACGGACGTACTTTGTCAGATTATAAT 3637 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 | || || ||||| || || ||||| || | |||||| | || ||| | || ||| | Sbjct 3636 ATTCAGAAAGAATCTACACTACATCTTGTACTCCGTCTTAGAGGCGGAAATGTCTAATAT 3577 Query 27646 TTT 27648 ||| Sbjct 3576 TTT 3574 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| || || || || | || || ||| || | Sbjct 4272 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAAGTCGAGGCATCT 4213 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | || || ||||||||||| ||||| || || ||||| || ||| Sbjct 4212 GATACGATAGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGTATCCCTCCGGATCAG 4153 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || || |||||||| |||| ||| || || | || || ||| Sbjct 4152 CAGAGATTGATCTTTGCAGGAAAACAACTCGAAGATGGTCGCACGCTTTCTGATTACAAT 4093 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||| | ||| |||| | ||||| || ||||| Sbjct 4092 ATTCAGAAGGAATCAACTTTACATTTAGTTCTTCGTCTACGTGGTGG 4046 >seq1592 Length=29089 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || | || || || ||||||||| | || || ||| | Sbjct 413 ATGCAAATTTTCGTCAAAACCTTGACGGGAAAAACTATTACTTTGGAAGTAGAGGCTTCA 354 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | || || |||||||| ||||| || || || ||||| || ||| Sbjct 353 GATACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGCATCCCTCCGGATCAG 294 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | ||||| || || ||||| || ||||| | || ||| | | || || ||| Sbjct 293 CAGAGATTGATTTTCGCGGGCAAGCAGCTGGAGGACGGACGCACCTTGTCCGATTACAAT 234 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||||||| ||| |||| ||||| |||||||| || Sbjct 233 ATTCAAAAGGAATCCACTCTGCATTTAGTTTTGCGACTTCGCGGAGG 187 Score = 125 bits (138), Expect = 8e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || || ||||| ||||| || ||||| | | Sbjct 869 ATGCAGATTTTTGTGAAGACATTAACTGGAAAAACTATAACTCTCGAAGTTGAAGCCTCT 810 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||||||||| ||||| ||||| || |||||| Sbjct 809 GACACTATCGAGAACGTAAAGGCGAAGATTCAGGACAAAGAGGGTATTCCACCTGACCAG 750 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| || || || || || || || | |||||| | | || || ||| Sbjct 749 CAGCGCTTGATTTTCGCCGGGAAACAGCTTGAAGACGGACGTACCTTGTCCGATTACAAT 690 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || |||||||||||||| ||||| || Sbjct 689 ATTCAGAAGGAATCCACTCTCCATCTGGT 661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||| || | || || ||||| || || | |||||||| | Sbjct 642 AATGCAGATCTTTGTCAAAACCTTGACGGGAAAGACCATCACATTGGAGGTTGAAGCTTC 583 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| | || || ||||||||||| || || || || || ||||| || Sbjct 582 AGACACGATCGAGAATGTCAAAGCGAAAATTCAGGATAAAGAAGGCATCCCCCCAGATCA 523 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | | || |||||||| || || || || || | || || || | ||||| || Sbjct 522 GCAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGACGGCCGCACGCTTTCCGACTACAA 463 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || ||| | || | || | ||||| || ||||| Sbjct 462 CATTCAGAAAGAGTCAACTTTGCACTTGGTTCTTCGTCTACGTGGTGG 415 >seq121 Length=74473 Score = 136 bits (150), Expect = 5e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || || || || |||||||| ||||| || | | Sbjct 8310 ATGCAGATTTTCGTCAAAACCCTCACTGGTAAAACCATTACTCTCGAGGTAGAAGCCTCT 8251 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | |||| |||| || || |||||||| || ||||||||||| ||||| ||| Sbjct 8250 GATACCATCGAAAATGTGAAAGCCAAGATTCAGGATAAAGAGGGAATTCCACCAGATCAG 8191 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| || || || || |||| ||||| || | || ||||| Sbjct 8190 CAGCGACTTATCTTTGCTGGAAAACAGCTGGAAGATGGACGTACTCTCTCTGATTATAAC 8131 Query 27586 GTCCAAAA 27593 ||||||| Sbjct 8130 ATCCAAAA 8123 >seq3434 Length=17783 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 143325 TGAGTAACGGGCCGAAACCTCGTTCACAGAGGCGGTACGGTGACGCAACCACTGGCGCGC 143384 |||||||||||| ||| || ||||| ||| |||| || || | |||||| ||||| Sbjct 8913 TGAGTAACGGGCAGAATATTCATTCACGCTGGCCATACGATGCCGAAGCCACTGACGCGC 8854 Query 143385 CACGAAAATAGGACACTTGATATGAAACTTGAAATCGACCATCTCAAATGGCGTCGTGTG 143444 || ||||| || |||| ||||| || | || ||| || || || ||||| || Sbjct 8853 AACAAAAATCGGCATTTTGACGTGAAATTTAATTTCACACATTTCGAAAGGGGTCGTATG 8794 Query 143445 ACGATGCCTCATGAGATAACGGATGAGACCACGGTCATCAGATACGC---TCTTGGTCCC 143501 ||| || | ||| | ||| ||||||||||| | ||| | || |||| || || Sbjct 8793 ACGGTGGCGCATCAAATAGCGGATGAGACC---TTTATCTTGAAGGCTTTTCTTTGTGCC 8737 Query 143502 TTGAGCGTAACTGACGCGAGCAGCCTGAACAATCGCTGCGTCATCACCCAT 143552 | | || || || |||||||| |||||||| || ||||| ||||| Sbjct 8736 GCGCCCATAGGAAACACGTGCAGCCTGCACAATCGCCGCATCATCTCCCAT 8686 >seq2923 Length=20019 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 32053 AAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCG 32112 ||||||||||| | |||||| || || ||||| |||| || || ||||||||| || Sbjct 7943 AAGGTGGCGCAATTAGCGGGCTCGGTCGCCGAGCACTCGGCTTACCATCACGGCGAGACG 7884 Query 32113 TCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAAC 32172 || || || || || | || |||||||| || || |||||| || || | || Sbjct 7883 TCCCTGATGGCGACTATAATTAATCTTGCTCAAAATTTCGTCGGTAGCAACAATATTAAT 7824 Query 32173 TTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGC 32232 | || |||| ||| || || || || |||||||||| || ||||| || ||||| Sbjct 7823 CTTCTACAGCCTATTGGTCAATTCGGTACAAGGCTCGCCGGAGGAAAGGACGCCGCGAGT 7764 Query 32233 TCCCGTTACATCTTCAC 32249 | | || || ||||| Sbjct 7763 CCGAGATATATTTTCAC 7747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570048028700480