Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq20287 91.5 1e-13 >seq20287 Length=1926 Score = 91.5 bits (100), Expect = 1e-13 Identities = 199/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 101367 TATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCATGACCGTGAT 101426 |||||| | || ||||| || || |||| |||||||| || || || |||||| || Sbjct 550 TATCTGATCGGCGGCGCGGTGCGCGATGCGCTGCTGGGGCGGCCGGTAACTGACCGCGAC 491 Query 101427 TACGTGGTTGTGGGT-GCAACACACGAAGAGATGATTGAAAAAGG-TTTCACCCAGGTTG 101484 || || || ||||| || || | ||| || ||| | | || |||| | | ||| | Sbjct 490 TATGTCGTGGTGGGCAGCGACCC-CGAGGAAATGCTGGGCTTGGGCTTTCGCGC-GGTAG 433 Query 101485 GCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTA 101544 || | ||| || |||| | |||| || || || || ||||| ||||||||||| | Sbjct 432 GCAAGGATTTTCCAGTGTTCCTGCACCCGGAGACGGGCGAGGAATATGCACTGGCCCGCA 373 Query 101545 CTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGCC-CGGATGTA 101603 | ||||| |||| ||| ||| || ||| || || || | | ||| | || ||| Sbjct 372 CCGAGCGCAAAAGCGGTCGCGGCTATCATGGGTTCCAG-GTTTATGCTGCCGCCGACGTA 314 Query 101604 ACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGC 101653 || ||||| | ||| | | || || ||||| || ||||||||||| || Sbjct 313 ACGTTGGAACAAGATCTGGCTCGCCGCGACCTCACCATCAATGCGATCGC 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457219959144480