Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq20287 102 8e-17 >seq20287 Length=1926 Score = 102 bits (112), Expect = 8e-17 Identities = 209/300 (70%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 16724 GCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTG-G 16782 ||||||||||| ||||| | ||| ||||| |||| ||| | ||| | || || || | | Sbjct 264 GCGATCGCATTGATGGTGAGGTCGCGGCGAGCCAGATCTTGTTCCAACGTTACGTCGGCG 323 Query 16783 GCTGAACATCACCTCGAAATCGTGGTATCCTGCGCCAG-TTGAACGCTCGGTACGGGCCA 16841 || | | | |||| ||| | || || || ||| | | || |||||||| ||||||| Sbjct 324 GCAGCATAA-ACCTGGAACCCATGATAGCC-GCGACCGCTTTTGCGCTCGGTGCGGGCCA 381 Query 16842 GGGCGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGCT 16901 | || || || || ||||| || |||||| | ||||| || | || || || Sbjct 382 GTGCATATTCCTCGCCCGTCTCCGGGTGCAGGAACACTGGAAAATCCTTGCCTACC-GCG 440 Query 16902 CGAA-GCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCT 16960 |||| ||| | ||| ||| || ||| || | ||| ||||| || ||||| ||||| Sbjct 441 CGAAAGCCCAAGCCCAGCATTTCCTCGGGGTCGCTGCCCACCACGACATAGTCGCGGTCA 500 Query 16961 -TTGCTCTCAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCAT 17019 || | | | |||| ||| ||||||| ||||||||||||| |||||| || | ||| Sbjct 501 GTTACCGGCCGC-CCCAGCAGCGCATCGCGCACCGCGCCGCCGATCAGATAAATCTGCAT 559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478794029425280