Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq35768 107 2e-18 >seq35768 Length=540 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48816 GTGAAAGTACGAGCGATAACGTCGCGCTGCTGTTCCGACGTCAGGGAGTTGAAGCGTACC 48875 ||||| ||||||| || ||||| |||| || || ||||| ||||||||||| || Sbjct 407 GTGAAGGTACGAGTAATGACGTCCTGCTGTTGCTCTTTGGTCAGCGAGTTGAAGCGCACG 466 Query 48876 GCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGCGTCC 48935 ||||| ||||| || || ||||||||||| || ||||| || |||| || | ||||||| Sbjct 467 GCGTAACCGGAGACGCGGATGGTCAGCTGAGGGTATTTCTCAGGATTTTCCATCGCGTCC 526 Query 48936 AGCAGAGTTTCACG 48949 ||||| |||| || Sbjct 527 AGCAGCATTTCGCG 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531828819540320