Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq10785 214 8e-51 >seq10785 Length=5498 Score = 214 bits (236), Expect = 8e-51 Identities = 538/808 (67%), Gaps = 25/808 (3%) Strand=Plus/Minus Query 64065 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 64124 |||||||||| | | || || |||||||||| ||| || || | |||||| Sbjct 4421 CCACCGGCTCACTGTCACTCGATATCGCTCTGGGCGCCGGCGGCCTGCCAATGGGCCGCA 4362 Query 64125 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 64184 | || ||||| |||||||| ||||| || || || | |||||| || || | | | | Sbjct 4361 TCGTCGAAATTTACGGCCCGGAATCCTCCGGTAAAACCACTCTGACGCTGCAGGTGATCG 4302 Query 64185 CCAATGCGCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCTGAGCACTCCCTGG 64241 || |||||| || ||||| || || | |||||| || |||||| | |||| Sbjct 4301 CCGCCGCGCAGCG---CGAAGGCAAAACCTGTGCGTTCATCGATGCCGAGCACGCGCTGG 4245 Query 64242 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC-AGCCG 64300 | ||| || || || ||| || || || |||||||||| || || | | ||||| Sbjct 4244 ATCCTATCTATGCGAAAAAGCTGGGCGTCGATATCGACAACCTGCTG-TGCTCCCAGCCG 4186 Query 64301 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 64360 ||||| ||||||||||| ||||| ||| ||| || | || |||| | | | Sbjct 4185 GACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGACCCGCTCCGGCGCGGTTGAC 4126 Query 64361 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 64420 || || |||| ||||| |||||||| ||| |||| || || ||||||| || ||| Sbjct 4125 GTCATCATCGTCGACTCCGTGGCGGCGCTGACGCCGAAGGCGGAAATCGAAGGTGAAATC 4066 Query 64421 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 64480 || || ||| | || || ||||| | ||| ||||| ||||| ||||| || Sbjct 4065 GGCGATTCGCACATGGGGTTGGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCC 4006 Query 64481 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 64540 |||| | | | | |||| || ||| | ||| |||||||| | || ||| || Sbjct 4005 GGCAACCTGAAAAACGCCAATACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATT 3946 Query 64541 GGCAACGTGGGCTACGG---CCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 64597 || ||| | ||| |||| || ||||| || ||||| || || ||| |||| Sbjct 3945 GG---TGTGATGTTCGGCAACCCG---GAAACCACGACCGGCGGTAACGCCCTGAAGTTC 3892 Query 64598 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCT 64657 ||||| || || || ||||| ||||||| |||| | || || |||||||| || | Sbjct 3891 TACGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAAAGAAGGCGACGAAGTG 3832 Query 64658 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 64717 || |||| | ||||| ||||| || || |||||||| | || ||||| | | Sbjct 3831 GTGGGCAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTCAAACAG 3772 Query 64718 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 64777 || |||||| || ||||||| || |||||| | | |||||| |||| ||| Sbjct 3771 GCTGAGTTCCAAATCATGTACGGCGAAGGCATCAACAGCCGTGGCGAACTGGTCGATCTG 3712 Query 64778 GCCGTGTCGCAGGGCCTGGT-GAAGAAGTCGGGCGCCTGGTTCA---AGTACGGGGACAA 64833 | |||| ||| || | ||| ||| | |||||||||| || | |||| || || Sbjct 3711 GGCGTGAAGCACAAGATGATCGAAAAAG-CCGGCGCCTGGTACAGCTATAACGGCGAGAA 3653 Query 64834 GAACGTCGCCCAGGGCAAGCCCAAGGCC 64861 || ||| ||||||||| | || ||| Sbjct 3652 GA---TCGGTCAGGGCAAGGCGAATGCC 3628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232698776415644