Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq34550 190 4e-44 >seq34550 Length=593 Score = 190 bits (210), Expect = 4e-44 Identities = 252/347 (73%), Gaps = 2/347 (1%) Strand=Plus/Plus Query 30130 CGCCAGTAACATGATTCTTCATTAATTCGCCAGTATGGCTGGTTAAATTCTTTTTCAGTC 30189 ||||| | ||| || || |||| ||| |||||||| ||||| ||||| || ||||| Sbjct 2 CGCCATTTACAGGACTCATCATCAATCCGCCAGTACGGCTGATTAAACTCGACCTCAGTT 61 Query 30190 AATCCGGCATGCATAAATAAAGTACGGCGCTGACTGACTGTTAAAAAACTAATATATGCA 30249 | |||||||||| |||||||| ||||| || || | |||||| | ||| || || Sbjct 62 AGCCCGGCATGCAGGAATAAAGTGCGGCGTTGGCTTATTGTTAATCGGCCAATGAATCCA 121 Query 30250 TACTCACTTGCGCCAACCTGACGGCGTTTTGAGAATGCGCCACGCAATTCATCAATTGCA 30309 | | ||| || || ||| | | ||| |||| || | ||||||||| || Sbjct 122 GATTTACTGATACCGTGCTTACGATAAGTAGCGAAAGCGCTGCGAAGTTCATCAATGGCG 181 Query 30310 CATACCAGTCGTTCACGTTCGACGTCGTTCATTTCTTCAAAACGCATCGTTGCGTGACGC 30369 || || || || || || ||| ||| |||||||| || || ||||| || || ||| Sbjct 182 CACACAAGACGCTCGCGCTCGCTGTCATTCATTTCCTCTAATCGCATAACAGCATGCCGC 241 Query 30370 TGTTTTAACTGCGCATGGAAGCAAACCGTTAGCCGTTCACGTTCCATCATCTGATTATAA 30429 |||||||||||||||||||| || | || || || || || |||||||||||||||||| Sbjct 242 TGTTTTAACTGCGCATGGAAACAGATGGTCAGGCGCTCGCGCTCCATCATCTGATTATAA 301 Query 30430 TAATCGCATGT-CTCCTGCCAGCGAGGGACGGCCAGATGCTTACCAA 30475 ||||||| || || || |||||||||| |||| || ||| |||| Sbjct 302 AAATCGCAGGTGCTTCT-CCAGCGAGGGGCGGCGAGGCGCTCCCCAA 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104392755458376