Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq23655 82.4 2e-11 >seq23655 Length=1398 Score = 82.4 bits (90), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 24657 ATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTTTA--CCTTGGTTT 24714 ||||| || || |||| ||| ||||||||||| |||||||| | | || ||| || | Sbjct 232 ATTGTCTTGTGAAACCCTTCACAGATGCCGTTTGTCTGCGG--GCTGTAAGCCTGGGGTC 175 Query 24715 TACTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGC 24774 | || || ||||| | || ||||| | ||| | | ||| | ||| |||| Sbjct 174 GTGTATGCTCGATATCTTCAATATTCAAATATAATTCAAACGCATGACTCTCTTTTTTGC 115 Query 24775 CACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTTTCAA 24834 |||| | | | || || ||||| ||||| ||||||| || || ||||| |||| Sbjct 114 CACAGAACGCCGTCCCGCGATCAGTCAATATCCGTAACAACGCTATCCCTTGCTCATCAA 55 Query 24835 AGTATGGTAACACTTTATCATTCAGCATATCCGCAGCA 24872 || | || ||||||| ||||| ||||| || || ||| Sbjct 54 AGAACGGCAACACTTGCTCATTGAGCATTTCTGCGGCA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114273235331248