Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq10785 214 9e-51 >seq10785 Length=5498 Score = 214 bits (236), Expect = 9e-51 Identities = 538/808 (67%), Gaps = 25/808 (3%) Strand=Plus/Minus Query 65758 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 65817 |||||||||| | | || || |||||||||| ||| || || | |||||| Sbjct 4421 CCACCGGCTCACTGTCACTCGATATCGCTCTGGGCGCCGGCGGCCTGCCAATGGGCCGCA 4362 Query 65818 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 65877 | || ||||| |||||||| ||||| || || || | |||||| || || | | | | Sbjct 4361 TCGTCGAAATTTACGGCCCGGAATCCTCCGGTAAAACCACTCTGACGCTGCAGGTGATCG 4302 Query 65878 CCAATGCGCAGAAGGCCGGTGGCAACGCC---GCCTACATCGACGCTGAGCACTCCCTGG 65934 || |||||| || ||||| || || | |||||| || |||||| | |||| Sbjct 4301 CCGCCGCGCAGCG---CGAAGGCAAAACCTGTGCGTTCATCGATGCCGAGCACGCGCTGG 4245 Query 65935 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC-AGCCG 65993 | ||| || || || ||| || || || |||||||||| || || | | ||||| Sbjct 4244 ATCCTATCTATGCGAAAAAGCTGGGCGTCGATATCGACAACCTGCTG-TGCTCCCAGCCG 4186 Query 65994 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCC 66053 ||||| ||||||||||| ||||| ||| ||| || | || |||| | | | Sbjct 4185 GACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGACCCGCTCCGGCGCGGTTGAC 4126 Query 66054 ATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATC 66113 || || |||| ||||| |||||||| ||| |||| || || ||||||| || ||| Sbjct 4125 GTCATCATCGTCGACTCCGTGGCGGCGCTGACGCCGAAGGCGGAAATCGAAGGTGAAATC 4066 Query 66114 GGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACC 66173 || || ||| | || || ||||| | ||| ||||| ||||| ||||| || Sbjct 4065 GGCGATTCGCACATGGGGTTGGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCC 4006 Query 66174 GGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATC 66233 |||| | | | | |||| || ||| | ||| |||||||| | || ||| || Sbjct 4005 GGCAACCTGAAAAACGCCAATACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATT 3946 Query 66234 GGCAACGTGGGCTACGG---CCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTC 66290 || ||| | ||| |||| || ||||| || ||||| || || ||| |||| Sbjct 3945 GG---TGTGATGTTCGGCAACCCG---GAAACCACGACCGGCGGTAACGCCCTGAAGTTC 3892 Query 66291 TACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCT 66350 ||||| || || || ||||| ||||||| |||| | || || |||||||| || | Sbjct 3891 TACGCTTCGGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAAAGAAGGCGACGAAGTG 3832 Query 66351 GTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAAC 66410 || |||| | ||||| ||||| || || |||||||| | || ||||| | | Sbjct 3831 GTGGGCAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTCAAACAG 3772 Query 66411 GCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTG 66470 || |||||| || ||||||| || |||||| | | |||||| |||| ||| Sbjct 3771 GCTGAGTTCCAAATCATGTACGGCGAAGGCATCAACAGCCGTGGCGAACTGGTCGATCTG 3712 Query 66471 GCCGTGTCGCAGGGCCTGGT-GAAGAAGTCGGGCGCCTGGTTCA---AGTACGGGGACAA 66526 | |||| ||| || | ||| ||| | |||||||||| || | |||| || || Sbjct 3711 GGCGTGAAGCACAAGATGATCGAAAAAG-CCGGCGCCTGGTACAGCTATAACGGCGAGAA 3653 Query 66527 GAACGTCGCCCAGGGCAAGCCCAAGGCC 66554 || ||| ||||||||| | || ||| Sbjct 3652 GA---TCGGTCAGGGCAAGGCGAATGCC 3628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242313661735508