Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_029120.1 Length=60875 Score E Sequences producing significant alignments: (Bits) Value seq13651 138 4e-28 >seq13651 Length=3921 Score = 138 bits (152), Expect = 4e-28 Identities = 310/460 (67%), Gaps = 12/460 (3%) Strand=Plus/Minus Query 25506 TCAGCG--GTAGTTCTGGCGCTGATTGCCGCAGGTGCTTCTGCGCCTGAAATCCTCGACC 25563 |||||| ||| | ||||| ||||| || || || || || || |||| || | | Sbjct 3521 TCAGCGCCGTAATGCTGGCCCTGATCGCGGCCGGCGCATCGGCTCCTGTCATGATGTCGC 3462 Query 25564 AGTTTCTGGATGAAAAGGAAGGTAACCACACCACGGCATACCGTGATGGTGTGGGTATCT 25623 |||||| ||| || || |||||| | | | || ||||||| || ||||| || |||| Sbjct 3461 AGTTTCAGGAAGAGAAAGAAGGTCAGCGCCTGACCGCATACCAGGACGGTGTTGGAATCT 3402 Query 25624 GGACCATCTGCCGTGGAGCCACCCGGGTGGATGGT---AAGCCTGTGATTCCTGGCATGA 25680 |||| || ||| | || | || ||| | || ||| ||||| |||| | Sbjct 3401 GGACAATTTGCGGCGGCGTGACGATGGTCAACGGCCAGAAGGTTGTGAAGG--GGCA-GC 3345 Query 25681 AGCTGTCGAAGGAAAAATGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCAT 25740 ||| | || | ||| | | | || |||| || | | | ||||| || | | Sbjct 3344 GCCTGACCGCCGAGCAGTGCAAGCAGATTGACGCAGCAGAGCAGAAAAAGGCTCTCGACT 3285 Query 25741 GGGTGGCGAAGAACATCAGAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCAT 25800 |||| | ||| ||| || | ||||| ||||| || |||| ||||| || |||| Sbjct 3284 GGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCTCAAAAAGTTGGTATCGCCTCAT 3225 Query 25801 TCTGTCCTTACAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAA--T 25858 ||||||| | ||||| ||||| || || || ||| | || || ||||| || ||| | Sbjct 3224 TCTGTCCGTGGAACATCGGCCCTGGAAAATGCTTCACCTCCACCTTTTACAA--GAAGCT 3167 Query 25859 TAATGCAGGTGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGG 25918 || || || || || | ||||||||| || || ||| | ||||| | |||| ||| Sbjct 3166 GAACGCCGGCGACCGCATTGGTGCCTGCCGAGAAATCCGCCGCTGGATATACGACGCTGG 3107 Query 25919 CAGAGACTGCCGTATCCGCTCAAATAATTGCTACGGTCAG 25958 | |||| ||||| |||||||| ||||| |||||||| ||| Sbjct 3106 CCGAGATTGCCGCATCCGCTCGAATAACTGCTACGGGCAG 3067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194593316291976