Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1592 96.9 3e-15 >seq1592 Length=29089 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 |||| ||| ||||| ||||||||||||||||||| || || || |||| || Sbjct 211 TGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGC 270 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 |||||||| | || | || || || || || | |||||||||||| |||||| Sbjct 271 TTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTGTCTTGAATTTTG 330 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTC 101215 ||| |||| | | ||| |||| | | | ||| | ||||||||||| |||||| Sbjct 331 GCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAATAGTTTTTCCCGTC 390 Query 101216 AATGTTTTAATAAAAATTTGCAT 101238 || ||||| | ||||||||||| Sbjct 391 AAGGTTTTGACGAAAATTTGCAT 413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409477047160236