Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq532 123 2e-23 >seq532 Length=46805 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || |||| | |||||| |||||||| ||||||||||| || ||||| Sbjct 27927 AATATAAGTTTCGATGAGTAAGGAATACATCTCAGAATGAATATTTTCTATGGCGATCTG 27868 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 || ||||| || || | ||||| | | || || || | || ||||| || | | Sbjct 27867 GAAGCCGTAGAAACAACGTGCTTCCGCGATTTTCACCTCTTGACTGAATCTCTCAATCAG 27808 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 || || || || || || || || ||||| |||||||| |||||||| |||||||| Sbjct 27807 ATTCTCATTAACGATTCCATCGGAAGCAGCAAAGAACGCCAAGACATGAGAGATAAAGTA 27748 Query 4997 CTGTTCGTCAGGCTTAAGTTT 5017 |||||||| |||||||| Sbjct 27747 TCTTTCGTCAGAATTAAGTTT 27727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426858047435732