Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_030929.1 Length=49033 Score E Sequences producing significant alignments: (Bits) Value seq13651 244 3e-60 >seq13651 Length=3921 Score = 244 bits (270), Expect = 3e-60 Identities = 537/800 (67%), Gaps = 10/800 (1%) Strand=Plus/Minus Query 7142 GAAGAGGTGACGTTCCGCTGTGGAGCCTGGCAGAAGGGTAGGCAGGAACAGCAGATGATC 7201 |||||||| || | || || | ||||||||||| || ||||||||||||| Sbjct 1915 GAAGAGGTAGCGATGCGTGCCGGTGGCTGGCAGAAGGCCAGAATGGAACAGCAGATGTGT 1856 Query 7202 CGTTGGTTCGGATACCTGCCGAGGTTTCTGATCACCCTGGCTGCTGACTACTGCTCCCAG 7261 |||||||| | |||||| || | ||||| |||||||| ||||||||||| ||| Sbjct 1855 GAGTGGTTCGGCGAGGTGCCGAAATTCATCATCACGCTGGCTGCCGACTACTGCTCACAG 1796 Query 7262 TGCTCCGACGCGGAGTTCTGCGCATTGGTCGAGCATGAGCTCTACCACATCTGCCAAGAG 7321 || || || || ||||| ||||| || ||||||||||||| ||||||||| || || Sbjct 1795 TGTTCTGATGCTGAGTTTTGCGCCCTGATCGAGCATGAGCTTTACCACATC-GCGCAGGC 1737 Query 7322 CACA-ACCAATATGGCGAGCCCAAGTTCACCGAGGAGGGCTTTCCAAAGCTGAAGCTCCG 7380 ||| || | | |||| || || |||| | |||| ||| || ||||||||| || Sbjct 1736 AACAGACGATTTCGGCGCACCGAAATTCAACAAGGAAGGCCAGCCGGTGCTGAAGCTGCG 1677 Query 7381 CGGGCATGACGTCGAGGAGTTCGTCGGCGTGGTGAGGCGGTACGGCCCAAGCAAGGACGT 7440 ||| || ||||| || ||||| || ||||| || | ||||| ||| | ||| ||| || Sbjct 1676 CGGCCACGACGTTGAAGAGTTTGTTGGCGTAGTTCGCCGGTATGGCGCCAGCGTGGAAGT 1617 Query 7441 GCAGTATCTCATCGACGCTGCTAGCAGGCCTCCAGAGGTGGCCAAAATTAACATTTCGAG 7500 ||| | || | || || || | |||||| | |||||||| || | |||||| | || Sbjct 1616 TCAGGAACTGGTTGATGCGGCCAACAGGCCCGCGGAGGTGGCACAACTAAACATTGCCAG 1557 Query 7501 AGCCTGCGGTACGTGCCTGCTGAAGTCGGCATAGCCACGACAGGCCCAT----GACAGGA 7556 ||| ||||||| ||| |||||| | ||| || | | || | | ||| ||| Sbjct 1556 AGCGTGCGGTAACTGCATGCTGAGGCTGGCGTA---AATATTGGACTGTATTGGAC-GGA 1501 Query 7557 AGAAAAACGATGGCAACCCTGAACAGCGACGTGAAGGCGTTCATCGTTCAGGCGCTGGCC 7616 | | ||||| | | || || || || || |||||| ||||| |||| || Sbjct 1500 TGGTGATTTATGGCTGCATTAAAACCAGATGTAAAAGCCTTCATCATTCAGTCGCTTGCG 1441 Query 7617 TGTTTCGATACGCCATCCCAGGTTGCGGAATCGGTCAAGAAGGAATTCGGCATCGAGGTC 7676 || || ||||| || | ||| | ||| || ||| | || || || || | | || Sbjct 1440 TGCTTTGATACCCCTACGTTGGTCGTGGAGTCCGTCCAAAAAGAGTTTGGGCTAAAAATC 1381 Query 7677 AGTCGGCAGCAGATCGAGTCGCACGACCCGAACAAGGTGTGCAGCAAGGGCCTTGCCGCG 7736 | || |||||| | || || |||||||||| ||||| || ||||| || || | Sbjct 1380 ACGCGTCAGCAGGTTGAATCTCACGACCCGACAAAGGTTAGCGGCAAGTCGCTGGCTAAG 1321 Query 7737 AAGTGGCGGATCCTCTTCGAGGACACCCGCAAGCGCTTCCGCGAGGAGATCGCCGACATC 7796 |||||| ||| ||| | || || |||| ||| || || | || || Sbjct 1320 AAGTGGGTAGACCTGTTCCATACGACGCGGGAGCGATTCAAGACAGAAATTTCAGATATT 1261 Query 7797 CCGATCGCCAACCGCGCCTACCGACTGAGGGCATTGGGTCGGATGGCTGAGCGCGCCGAG 7856 |||||||||||| |||||||| ||| | | | | ||| ||||| ||| |||| Sbjct 1260 CCGATCGCCAACAAGGCCTACCGGCTGCGCGTTCTTGATCGCATGGCGACGCGAACCGAA 1201 Query 7857 GGCATGCGAAACATGGCCCTGGCTGCCCAGCTTTACGAGCAGGCCGCCAAGGAGTCGGGT 7916 |||| ||| || |||| || ||| | |||||||||||| || |||| || Sbjct 1200 ACCATGAAGAACTACGCATTGGCCGCTCAGATCGTCGAGCAGGCCGCGAAAGAGTGCGGC 1141 Query 7917 GGCATGTACAGCAACAAGCA 7936 | ||| | ||||||||| Sbjct 1140 GATGCGTATACCAACAAGCA 1121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156715477944760