Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_031050.1 Length=51802 Score E Sequences producing significant alignments: (Bits) Value seq680 96.9 1e-15 >seq680 Length=42727 Score = 96.9 bits (106), Expect = 1e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 22861 GGCGGCTACACTGGCGACGGCGGCAAGTATGCGCCAGCGGGCGTGGTTCACCGTGGCGAG 22920 ||||| || || || |||||||||||||||| || || || ||||| ||||||||||| Sbjct 3635 GGCGGGTATACCGGTGACGGCGGCAAGTATGAACCGGCCGGGGTGGTACACCGTGGCGAA 3694 Query 22921 TTCGTTATGACGAAGGAGGCAACGAAGAGAATCGGTGTTGATAATCTTTACCGAATGATG 22980 ||||||||| ||||||| | || | | ||||| || | ||| || ||| |||||| Sbjct 3695 TTCGTTATGCCGAAGGAAGACACCGCGCGCATCGGCGTCGCTAACCTGTACGCGATGATG 3754 Query 22981 CGC 22983 ||| Sbjct 3755 CGC 3757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165572405354272