Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq35768 107 2e-18 >seq35768 Length=540 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47341 CGCGAAACCTTGCTGGATGCGGTTGAGCACCCAGAAAAATACCCGCAGCTGACTATTCGC 47400 ||||||| ||||||| ||| | || | || || |||||||| |||||||| || ||| Sbjct 540 CGCGAAATGCTGCTGGACGCGATGGAAAATCCTGAGAAATACCCTCAGCTGACCATCCGC 481 Query 47401 GTTTCCGGATACGCGGTGCGCTTCAACTCCTTGACACCAGAACAGCAGCGCGACGTTATC 47460 || ||||| ||||| |||||||||||||| |||| ||| || |||| ||||| || Sbjct 480 GTCTCCGGTTACGCCGTGCGCTTCAACTCGCTGACCAAAGAGCAACAGCAGGACGTCATT 421 Query 47461 GCTCGTACTTTCAC 47474 ||||||| ||||| Sbjct 420 ACTCGTACCTTCAC 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539649220109120