Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq19207 1294 0.0 seq27420 150 1e-31 seq14309 134 9e-27 seq35391 87.8 1e-12 >seq19207 Length=2170 Score = 1294 bits (1434), Expect = 0.0 Identities = 1127/1389 (81%), Gaps = 16/1389 (1%) Strand=Plus/Plus Query 58566 GGCTCTGC--CGCCAGACGTAATCGCCGGTTAGGTTGATGTGCTCCCAGCCCAGCGGCGA 58623 ||| |||| ||||||| ||||||||| || ||||||||||| |||||||||||||| || Sbjct 729 GGCGCTGCTGCGCCAGAGGTAATCGCCCGTCAGGTTGATGTGTTCCCAGCCCAGCGGTGA 788 Query 58624 CAGGAATTGCAGCAGCTCGCCGTCCACCGGCTTGCCG--GCCTCGACCAACCCCTGGGTG 58681 |||| | || | |||| || | || || | | |||| ||| || ||| || | Sbjct 789 CAGGTACTGAAACAGCGCGTCATCGACGGCATGGCCGTTGCCGCG--CAAGGATTGCGCT 846 Query 58682 GCGCGTTCCAGGTACACCGTGTTCCACAGCACGATAGCCGCCGTCACCAGGTTGAGGCCG 58741 ||||||||||| || || ||||||||||||||||| || ||||||||||||||||||||| Sbjct 847 GCGCGTTCCAGATAGACGGTGTTCCACAGCACGATGGCTGCCGTCACCAGGTTGAGGCCG 906 Query 58742 CTGGCCCGGTAGCGCTGCTGCTCGAAGCTCCGATCCCTGATTTCCCCAAGGCGGTTGAAG 58801 ||||| ||||||||||||||||| ||||| || || | |||||| || || ||||||||| Sbjct 907 CTGGCTCGGTAGCGCTGCTGCTCAAAGCTGCGGTCACGGATTTCGCCCAGCCGGTTGAAG 966 Query 58802 AACACCGCCCTGGCCAGCGAGTTGCGCGCCTCACCTTTGTTCAGGCCGGCATGCACGCGG 58861 ||||||||||||||||||| |||||| || || || |||||||| |||||||| || ||| Sbjct 967 AACACCGCCCTGGCCAGCGTGTTGCGGGCTTCGCCCTTGTTCAGCCCGGCATGGACACGG 1026 Query 58862 CGGCGCAGTTCAACACTTTGCAGCCAGTCCAGGATGAACAGCGTGCGCTCGATCCGGCCC 58921 ||||| || || || |||||||||||||||| ||||||||||||||||||||| || ||| Sbjct 1027 CGGCGTAGCTCGACGCTTTGCAGCCAGTCCAAGATGAACAGCGTGCGCTCGATGCGCCCC 1086 Query 58922 AGCTCGCGCAGGGCCACGGCCAGTCCGTTCTGGCGCGGGTAGCTGCCGAGCTTGCGCAGC 58981 ||||| ||||||||||||||||| || |||||||| |||||||||||||| || | ||| Sbjct 1087 AGCTCACGCAGGGCCACGGCCAGGCCATTCTGGCGTGGGTAGCTGCCGAGTTTCCTGAGC 1146 Query 58982 ATCAGCGAGGCGGTGACGGTGCCCTGCTTGATCGAGCTGGCCAGGCGCAGGATGTCGTCC 59041 ||||||||||| || || || || |||||||||||| | ||||| |||||||| || ||| Sbjct 1147 ATCAGCGAGGCCGTCACAGTACCTTGCTTGATCGAGGTAGCCAGCCGCAGGATTTCATCC 1206 Query 59042 CAGTGGGCACGCACGTGCTTGATGTTCAGGGTGCCGCCGATCAGCGG---GCGCAACGTC 59098 || ||||| || || ||| ||||||| | ||||||||||||| ||| | || |||| Sbjct 1207 CAATGGGCGCGGACATGCATGATGTTGAACGTGCCGCCGATCATCGGCTTGAGCG-CGTC 1265 Query 59099 GGGTAGGCTTGCA-CGCCCTGCGGCACGTACAGCTTGGTTTCGCCGAGGTCGCGGATGCG 59157 || || ||| |||||| || | ||| ||| |||| ||||| || ||||||||||| Sbjct 1266 A--TACGCA-GCATCGCCCTTTGGAATGTAGAGCGTGGTGTCGCCCAGATCGCGGATGCG 1322 Query 59158 CGGCGCGAAGCGGAAGCCTAGCAGGTGCATCAGGGCAAAGACGTGATCGGTGAAGCCGGC 59217 |||||| || |||||||| |||||||||||||| || |||||||||||||||||||| || Sbjct 1323 CGGCGCAAAACGGAAGCCCAGCAGGTGCATCAGTGCGAAGACGTGATCGGTGAAGCCCGC 1382 Query 59218 CGTGTCGGTGTAGTGCTCCTCGATCCGCAGGTCGGACTCGTGGTACAGCAGGCCGTCGAG 59277 |||||||||||||| ||||| || || |||||||||||||||||||||||||| ||||| Sbjct 1383 TGTGTCGGTGTAGTGTTCCTCAATGCGTAGGTCGGACTCGTGGTACAGCAGGCCATCGAG 1442 Query 59278 CACATAGGTGGAATCGCGGACGCCGACATTCACCACGCGGGTGCTGAACGGCGCGTACTG 59337 ||||||||| || ||||| || |||||||| ||||| ||| ||||||||| ||||| Sbjct 1443 CACATAGGTCGAGTCGCGCACACCGACATTGACCACTTTGGTATGGAACGGCGCATACTG 1502 Query 59338 GTCGGAGATATGGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCGGGTTGACGTG 59397 | ||||||||||||| |||||| ||| || || ||| ||||| |||||||||| ||| Sbjct 1503 GGCGGAGATATGGGTGTAGAACGTCCGCCCTGGACTGCTGCCGTATTTCGGGTTGATGTG 1562 Query 59398 CCCGGTGCTCTCGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGT 59457 |||||| |||||| || || || | ||||||| ||| || || || ||||| || || Sbjct 1563 CCCGGTACTCTCGGCCTTGCTGCCGGTGCGGAAGTTCTGACCGTCCGACGATGACGTGGT 1622 Query 59458 GCCGTCGCCCCAGTGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAA 59517 |||||||||||| || |||| |||| ||| || | ||| ||||||||| ||||||| Sbjct 1623 GCCGTCGCCCCAATGCTCGGCGAAGGGGTGCCGGAATTGGGCGTTGACCAGTTCGGCCAG 1682 Query 59518 GGCCGCCGAATAGGTTTCGTCGCGGATGTGCCAGGCTTGCAGCCAGGACAGCTTGGCGTA 59577 |||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||| Sbjct 1683 CGCCGCCCCGTAGGTTTCGTCGCGGGTATGCCAGGCTTGCAGCCAGGCGAGCTTGGCGTA 1742 Query 59578 GGTCAGGCCGGGGCTCGACTCGGCCATCTTGGTCAGCCCGAGGTTGATCGCATCACCGAG 59637 |||| ||| |||| ||||||||||||||||||| |||||||||||||| ||| | || Sbjct 1743 GGTCGTGCCAGGGCAGGACTCGGCCATCTTGGTCAAACCGAGGTTGATCGCGTCAGCCAG 1802 Query 59638 GATTGCGGACAGCAGCAACGTCCTGTCTTTGGCCTCGGCCCCGTCCTTCAAGTGGGTGAA 59697 ||| | || || || || || |||| |||||| | | || |||| ||| || || Sbjct 1803 GATCGTGGTCAACAACAGGTTCTTGTCCTTGGCCAGGTCGCCCGATTTCAGGTGCGTAAA 1862 Query 59698 GTGGCGGCTGAAGCCCGTCCAGTCGTCCACGTCCATCAGCAGTTCGGTGATCTTGATGCG 59757 ||| ||| ||||||||||||| || || || || | ||||| ||| |||||||||| | | Sbjct 1863 GTGCCGGGTGAAGCCCGTCCACTCATCGACTTCGAGCAGCAATTCTGTGATCTTGACGTG 1922 Query 59758 CGGCAGTAAC-TGGCTGGTTTGGTCGATCAGCGCCTGCGCCCGATCCGGCACCGCCGCAT 59816 |||||| | | |||| || |||||||||||||||||||| |||||||||||||||| Sbjct 1923 CGGCAGGATCATGGC-CGTCTGGTCGATCAGCGCCTGCGCGGTGTCCGGCACCGCCGCAT 1981 Query 59817 CCAGCGGGGTGATTTTCAGCCCTGACTCGGTGAGGATGGCATCGGGCAGCTCGTTGTCCT 59876 ||||||| ||||| ||||| || |||||||||| |||||| || ||||| |||||| | Sbjct 1982 CCAGCGGCGTGATCTTCAGGCCCGACTCGGTGATGATGGCGTCCGGCAGGTCGTTGGCTG 2041 Query 59877 TGGCCAGGCGGGTGACGGTGGCCAACTGCTCGTCCAGCAGCTGCAAACGCTCTTCCAGGT 59936 |||| |||| |||| ||||| | ||| | |||||||||| ||| ||||| ||||| Sbjct 2042 CCGCCATGCGGTTGACCGTGGCAAGTTGCGCCTCCAGCAGCTCCAAGCGCTCGCTCAGGT 2101 Query 59937 ACTGGTCGC 59945 ||||||||| Sbjct 2102 ACTGGTCGC 2110 >seq27420 Length=994 Score = 150 bits (166), Expect = 1e-31 Identities = 261/372 (70%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 96698 GCATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGG 96757 || ||||| || ||| | |||||| || ||| | | | ||| || || | ||| Sbjct 614 GCGTAGTTCTCGAACTTGGTGTATTGACCTAGAAAGGTGAGTTTCATGGTACCGGTGGGG 673 Query 96758 CCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTAT-CCGGGTG 96816 || || || ||||| ||||| || | ||||| | |||||| | || || || || Sbjct 674 CCGTTGCGCTGCTTGCCGATGATGATTTCGGCCA-GCCCTTTGTCGGGCGATTCCTTGTT 732 Query 96817 ATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGA 96876 || ||||| || || | |||||||| | || || |||||||| || || || || Sbjct 733 GTAGTACTCGTCACGGTAGATGAACATGATGACATCGGCATCCTGCTCGATAGCGCCCGA 792 Query 96877 TTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAG 96936 |||||| | ||| || | | ||| || ||||||||||||||||| ||||| || || || Sbjct 793 TTCACGCAGATCGGACATCATCGGCCGCTTGTCCGCACGCTGTTCCAGCGAGCGGTTGAG 852 Query 96937 TTGTGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGA 96996 || |||| || | |||||| || | | ||| |||||||| |||||| || || || Sbjct 853 CTGGGACAGCGCGATCACCGGCACATTGAGTTCTTTCGCCAAGCCCTTCAACGAACGCGA 912 Query 96997 AATCTCGGCAATTTC--CAGCGTTCGGTTAT-CTTGCAGCTCCGGGACGCGCATAAGTTG 97053 |||||||| ||| || |||| ||||| | |||| || |||| || |||| | || Sbjct 913 AATCTCGGAAATCTCGGTAGCG--CGGTTTTCCTTGTTGC-CCGGCACCTGCATCAACTG 969 Query 97054 CAGGTAGTCGAT 97065 || ||||||||| Sbjct 970 CAAGTAGTCGAT 981 >seq14309 Length=3649 Score = 134 bits (148), Expect = 9e-27 Identities = 142/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 61294 ACCGGGGTAGCGCAGCAGGCAGAGCTGCACGGCGAAGCCGAGGCGGTTGGCGTCGCCGCG 61353 ||||||| ||||||||| ||| | |||||| |||| ||| || || ||||| |||||||| Sbjct 361 ACCGGGGAAGCGCAGCAAGCACAACTGCACTGCGACGCCCAGACGATTGGCATCGCCGCG 420 Query 61354 TCGCTGGCGGATCAGCGACAGGTCGGAGTCGTTGAAGGTGTAGTAGCGGATCAGGTCATC 61413 ||||||| |||||||||||||||| || ||||| ||||| ||||| || ||||| Sbjct 421 CCGCTGGCCAATCAGCGACAGGTCGGTTTCACCGAAGGCGTAGTGCCGGATGAGTTCATC 480 Query 61414 CTGGCTTTCCGGCAGCGCAAGCAGGGTGTCCCGCTCCGTGGCCGAGAGGATCAAGCGACG 61473 | | | || || || || ||| | ||||||| |||| || |||||| | || || Sbjct 481 TTCGGTGTCGGGTGGCAACAGTAGGCTTGCCCGCTCGGTGGTGGACAGGATCGAACGGCG 540 Query 61474 CGGCATG 61480 |||||| Sbjct 541 TGGCATG 547 >seq35391 Length=557 Score = 87.8 bits (96), Expect = 1e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 98311 AAATATGGTGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTC 98370 |||| ||||||||||| || ||||||| |||| |||||||||||||||| |||| Sbjct 111 AAATTTGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTC 170 Query 98371 TAACCACTGAGCTAAAGGGCC 98391 ||||||||||||||| ||||| Sbjct 171 TAACCACTGAGCTAAGGGGCC 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330750775577464