Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lasius_20niger_20[genbank_20GCA_5F001045655.1_202015-07-02] 36,804 sequences; 236,236,391 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2779 150 4e-31 seq1592 125 2e-23 seq12857 116 9e-21 seq121 104 5e-17 >seq2779 Length=20704 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||| || || || || ||||| |||||||||| | |||||| |||||| Sbjct 8392 AGGACCAGATGAAGCGTGGATTCCTTCTGGATATTGTAATCGGAAAGAGTTCTGCCATCT 8451 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||| || || | |||||| |||| | ||||| || || || Sbjct 8452 TCAAGTTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCC 8511 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || ||| | |||| | | |||||| || |||||||| || || ||| Sbjct 8512 TGGATTTTGGCCTTCACATTTTCTATGGTATCTGAAGCTTCAACTTCAAGGGTGATGGTT 8571 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||||||||| || |||| ||||||| Sbjct 8572 TTGCCTGTGAGAGTCTTTACAAAGATCTGCATT 8604 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| ||||| || ||||| || || ||||||| | |||||| |||||||| || Sbjct 8173 TGAAGTGTAGATTCCTTTTGAATATTATAATCGGAAAGAGTTCTGCCATCTTCCAGCTGC 8232 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||| || || || | ||||| || | | |||||||| || || || |||||| Sbjct 8233 TTACCGGCAAAAATGAGACGTTGCTGATCGGGAGGAATTCCTTCTTTGTCCTGGATTTTT 8292 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||| || |||| | | |||||||| || |||||||||||||| |||||||| || Sbjct 8293 GCTTTTACGTTCTCGATGGTGTCTGAAGCTTCGACTTCAAGAGTAATGGTTTTGCCTGTA 8352 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||| |||| ||||||| Sbjct 8353 AGAGTTTTCACAAAGATCTGCATT 8376 >seq1592 Length=29089 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| || || ||||| || |||||||||| || || | || || || || Sbjct 210 ATGCAGAGTGGATTCCTTTTGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTG 269 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || ||||| || | |||||||| |||| | ||| ||||| || ||||||||||| Sbjct 270 CTTGCCCGCGAAAATCAATCTCTGCTGATCCGGAGGGATGCCTTCTTTGTCTTGAATTTT 329 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||||| |||| | | |||||| ||||||||| | |||||||||||| ||||| Sbjct 330 GGCTTTGACATTCTCGATCGTATCTGAAGCCTCTACTTCCAAAGTAATAGTTTTTCCCGT 389 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| | ||||| Sbjct 390 CAAGGTTTTGACGAAAATTTGCAT 413 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 |||||| || ||||| ||||| || || || || || |||||||||| || || | || Sbjct 654 TCTGAGAACCAGATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGACAAGGTACGTCC 713 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||||| || |||||||||||| || | | ||||||||| | | || || || || Sbjct 714 GTCTTCAAGCTGTTTCCCGGCGAAAATCAAGCGCTGCTGGTCAGGTGGAATACCCTCTTT 773 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || ||||| || || || |||| | |||| || || ||||| ||||| || Sbjct 774 GTCCTGAATCTTCGCCTTTACGTTCTCGATAGTGTCAGAGGCTTCAACTTCGAGAGTTAT 833 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || | |||||||| || | |||||| Sbjct 834 AGTTTTTCCAGTTAATGTCTTCACAAAAATCTGCAT 869 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 151920 TGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGC 151979 || || |||||||||| || || | || || || || || || ||||| || | Sbjct 1 TGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGCTGCTTGCCCGCGAAAATCAAT 60 Query 151980 CTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACG 152039 |||||||| |||| | || ||||| || ||||||||||| ||||||| |||| | Sbjct 61 CTCTGCTGATCCGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATC 120 Query 152040 CTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACC 152099 | || || ||| ||||| | || || ||||| || ||||||||||| ||||| | | Sbjct 121 GTATCAGATGCCTCGACTTCCAATGTGATGGTTTTACCGGTGAGAGTCTTGACGAAAATC 180 Query 152100 TGCAT 152104 ||||| Sbjct 181 TGCAT 185 >seq12857 Length=4317 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| | ||| || || || || || |||||||| | | || | |||||| Sbjct 4061 AGAACTAAATGTAAAGTTGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGACCATCT 4120 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| | |||||||| |||| | ||| |||||||| || Sbjct 4121 TCGAGTTGTTTTCCTGCAAAGATCAATCTCTGCTGATCCGGAGGGATACCTTCCTTATCC 4180 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||||||| |||||| | || || ||| ||||| | || || ||| Sbjct 4181 TGAATTTTGGCTTTGACATTCTCTATCGTATCAGATGCCTCGACTTCCAATGTGATGGTT 4240 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||||||||| ||||| | |||||| Sbjct 4241 TTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4272 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || || || || | ||| |||||||| || || || || |||||||| | | || | Sbjct 3827 AGCCTCAGAACTAAATGCAGAGTAGATTCCTTCTGAATATTGTAATCAGAAAGCGTGCGA 3886 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || ||| || || || || | ||||| || |||| | ||| ||||| Sbjct 3887 CCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATGCCTTCT 3946 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || |||||||| ||||||| | || | | || || ||| ||||| | || Sbjct 3947 TTGTCCTGAATTTTGGCTTTGACATTTTCAATTGTATCGGATGCCTCGACTTCCAATGTG 4006 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||| ||||| | |||||| Sbjct 4007 ATGGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 4044 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | ||| |||||||| || ||||| ||||| || || || ||||| | ||||| Sbjct 3596 CTAAGACGGAGTACAAGATGTAGTGTAGATTCTTTCTGAATATTATAATCTGACAAAGTA 3655 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || || || || || || ||||| || || || ||||| || | | || || Sbjct 3656 CGTCCGTCCTCGAGCTGCTTGCCCGCGAAAATCAGTCTTTGCTGATCAGGAGGAATGCCC 3715 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| || ||| |||| | | || ||| |||||| || | | Sbjct 3716 TCTTTGTCTTGAATTTTAGCCTTTACATTCTCGATCGTATCCGAAGCCTCTACCTCCAAA 3775 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || | ||| || ||||| | ||||| Sbjct 3776 GTGATAGTTTTTCCTGTCAAAGTTTTGACGAAAATTTGCAT 3816 >seq121 Length=74473 Score = 104 bits (114), Expect = 5e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||||||||| ||||| | | ||| | |||||||| || ||| || || |||| Sbjct 8121 CTTTTTGGATGTTATAATCAGAGAGAGTACGTCCATCTTCCAGCTGTTTTCCAGCAAAGA 8180 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 |||| | |||||| || | | ||||| || || || ||||| || ||| ||| | | Sbjct 8181 TAAGTCGCTGCTGATCTGGTGGAATTCCCTCTTTATCCTGAATCTTGGCTTTCACATTTT 8240 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | | || || ||||| || |||||||| ||||| || ||||| || || |||| Sbjct 8241 CGATGGTATCAGAGGCTTCTACCTCGAGAGTAATGGTTTTACCAGTGAGGGTTTTGACGA 8300 Query 152095 AGACCTGCAT 152104 | | |||||| Sbjct 8301 AAATCTGCAT 8310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153276714359484